Amplicon details

Amplicon:

523 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc cacttttttc aaaaaagtgg ttctcaaact
151   agaacccaaa ggaaaaggat aggtgcagag actcaatgga agctcttcta
201   acgaatcgaa gtaataacga ttaatcacag aacccatatt ataatatagg
251   ttctttattt tattttgaga atgaaattag gaatgattat gaaatagaaa
301   attcataatt tttttagaat tattgtgaat ctattccaat cgaatattga
351   gtaatcaaat ccttcaattc attgttttcg agatctttta aaaagtggat
401   taatcggacg aggataaaga gagagtccca ttctacatgt caatactgac
451   aacaatgaaa tttctagtaa aaggaaaatc cgtcgacttt ataagtcgtg
501   agggttcaag tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
CP137827.1 nt Sorghum bicolor cultivar Hongyingzi... 80770984 bp Sorghum bicolor QL-PLN-00-007 523 bp View
CP137837.1 nt Sorghum bicolor cultivar Huandiaonu... 81178864 bp Sorghum bicolor QL-PLN-00-007 523 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.