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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947696.1 nt Mus musculus targeted non-condition... 38020 bp Mus musculus QL-ELE-00-002 215 bp View
JN947697.1 nt Mus musculus targeted non-condition... 37898 bp Mus musculus QL-ELE-00-002 215 bp View
AY745746.1 nt PGeneClip Neomycin Vector, complete... 4758 bp pGeneClip Neomycin Vector QL-ELE-00-002 215 bp View
AY456904.1 nt Binary vector pRE1, complete sequence. 9769 bp Binary vector pRE1 QL-ELE-00-002 215 bp View
AY781296.1 nt Expression vector pBI121_pro T-DNA ... 8196 bp Expression vector pBI121_pro QL-ELE-00-002 215 bp View
AY804024.1 nt Binary vector pGA643, complete sequ... 11601 bp Binary vector pGA643 QL-ELE-00-002 215 bp View
AY817672.1 nt SIV vector pCLN8, complete sequence. 19831 bp SIV vector pCLN8 QL-ELE-00-002 215 bp View
DQ164215.1 nt Shuttle vector pPW380, complete seq... 9219 bp Shuttle vector pPW380 QL-ELE-00-002 215 bp View
JN948558.1 emblreltgn Mus musculus targeted KO-first, con... 38922 bp Mus musculus QL-ELE-00-002 215 bp View
JN948559.1 emblreltgn Mus musculus targeted KO-first, con... 38989 bp Mus musculus QL-ELE-00-002 215 bp View
DQ228130.1 nt Moss transformation vector pMBL5, c... 4296 bp Moss transformation vector pMBL5 QL-ELE-00-002 215 bp View
AY589053.1 nt Mus musculus transgenic truncated l... 5535 bp Mus musculus QL-ELE-00-002 215 bp View
JN948560.1 emblreltgn Mus musculus targeted non-condition... 38026 bp Mus musculus QL-ELE-00-002 215 bp View
AY738638.1 nt Cloning vector pJK95, complete sequ... 4791 bp Cloning vector pJK95 QL-ELE-00-002 215 bp View
AY841887.1 nt Trafficking reporter vector pIN-G p... 5042 bp Trafficking reporter vector pIN-G QL-ELE-00-002 215 bp View
U23751.1 nt Cloning vector pBBR1MCS-2 plasmid p... 5144 bp Cloning vector pBBR1MCS-2 QL-ELE-00-002 215 bp View
DQ408591.1 nt Transposon mutagenesis vector pG18-... 7657 bp Transposon mutagenesis vector pG18-STM QL-ELE-00-002 215 bp View
JN948561.1 emblreltgn Mus musculus targeted non-condition... 38271 bp Mus musculus QL-ELE-00-002 215 bp View
DQ377843.1 nt Mus musculus transgenic G610C Neo+ ... 2766 bp Mus musculus QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.