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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ022572.1 nt Expression vector pEGFP-Pax9, compl... 5738 bp Expression vector pEGFP-Pax9 QL-ELE-00-002 215 bp View
DQ349231.1 nt Expression vector peTetOn/FKNF(PacI... 11676 bp Expression vector peTetOn/FKNF(PacI) QL-ELE-00-002 215 bp View
M99569.1 nt sCos cloning vector SfiI containing... 8164 bp unidentified cloning vector QL-ELE-00-002 215 bp View
M99566.1 nt sCos cloning vector SfiI containing... 7937 bp unidentified cloning vector QL-ELE-00-002 215 bp View
U00004.1 nt Escherichia coli transposon Tn5, co... 5818 bp Escherichia coli QL-ELE-00-002 215 bp View
AF406953.1 nt Expression vector pSTKST, complete ... 4663 bp Expression vector pSTKST QL-ELE-00-002 215 bp View
AY048743.1 nt Template plasmid pKD4, complete seq... 3267 bp Template plasmid pKD4 QL-ELE-00-002 215 bp View
AY048744.1 nt Template plasmid pKD13, complete se... 3434 bp Template plasmid pKD13 QL-ELE-00-002 215 bp View
AF411123.1 nt Transposon vector phiMycoMarT7, com... 2068 bp Transposon vector phiMycoMarT7 QL-ELE-00-002 215 bp View
AF402295.1 nt pk[BIG-alpha] piggyBac transformati... 7414 bp pk[BIG-alpha] piggyBac transformation vector QL-ELE-00-002 215 bp View
JN947683.1 nt Mus musculus targeted non-condition... 38898 bp Mus musculus QL-ELE-00-002 215 bp View
AY048713.1 nt CRIM plasmid pAH55, complete sequence. 6664 bp CRIM plasmid pAH55 QL-ELE-00-002 215 bp View
AY048714.1 nt CRIM plasmid pAH56, complete sequence. 6668 bp CRIM plasmid pAH56 QL-ELE-00-002 215 bp View
AY048716.1 nt CRIM plasmid pAH63, complete sequence. 3663 bp CRIM plasmid pAH63 QL-ELE-00-002 215 bp View
AY048719.1 nt CRIM plasmid pAH70, complete sequence. 3534 bp CRIM plasmid pAH70 QL-ELE-00-002 215 bp View
AY048722.1 nt CRIM plasmid pAH95, complete sequence. 3843 bp CRIM plasmid pAH95 QL-ELE-00-002 215 bp View
AY048723.1 nt CRIM plasmid pAH120, complete sequence. 2959 bp CRIM plasmid pAH120 QL-ELE-00-002 215 bp View
AY048733.1 nt CRIM plasmid pAH150, complete sequence. 3695 bp CRIM plasmid pAH150 QL-ELE-00-002 215 bp View
AY054372.1 nt CRIM plasmid pAH125, complete sequence. 5739 bp CRIM plasmid pAH125 QL-ELE-00-002 215 bp View
AF430344.1 nt Synthetic construct mutated HIV-1 D... 9918 bp synthetic construct QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.