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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY150267.1 nt CRIM plasmid pLZ31, complete sequence. 5706 bp CRIM plasmid pLZ31 QL-ELE-00-002 215 bp View
AB086433.1 nt Synthetic construct gene trap vecto... 10856 bp synthetic construct QL-ELE-00-002 215 bp View
AB086434.1 nt Synthetic construct gene trap vecto... 10212 bp synthetic construct QL-ELE-00-002 215 bp View
AB086435.1 nt Synthetic construct gene trap vecto... 9863 bp synthetic construct QL-ELE-00-002 215 bp View
AB086436.1 nt Synthetic construct gene trap vecto... 10320 bp synthetic construct QL-ELE-00-002 215 bp View
JN948553.1 emblreltgn Mus musculus targeted non-condition... 39832 bp Mus musculus QL-ELE-00-002 215 bp View
JN948554.1 emblreltgn Mus musculus targeted KO-first, con... 37926 bp Mus musculus QL-ELE-00-002 215 bp View
JN948555.1 emblreltgn Mus musculus targeted KO-first, con... 38434 bp Mus musculus QL-ELE-00-002 215 bp View
AB119282.1 nt Hepatitis C virus gene for Fusion p... 9658 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
AJ430835.1 nt Cloning vector pTarg2 8245 bp Cloning vector pTarg2 QL-ELE-00-002 215 bp View
AJ430835.1 nt Cloning vector pTarg2 8245 bp Cloning vector pTarg2 QL-ELE-00-002 215 bp View
CR293496.1 nt 5'HPRT (MHPN) vector for insertion ... 9912 bp Cloning vector 5'HPRT QL-ELE-00-002 215 bp View
AJ627603.1 nt Cloning vector pRAY-Cre 7254 bp Cloning vector pRAY-Cre QL-ELE-00-002 215 bp View
JN947682.1 nt Mus musculus targeted non-condition... 37755 bp Mus musculus QL-ELE-00-002 215 bp View
AB127589.1 nt Cloning vector pHN267 KanR gene for... 1354 bp Cloning vector pHN267 QL-ELE-00-002 215 bp View
AY818371.1 nt Kanamycin resistance plant expressi... 4640 bp Kanamycin resistance plant expression vector pSAT4-nptII QL-ELE-00-002 215 bp View
AY860420.1 nt Cloning vector MuNXKan, complete se... 37199 bp Cloning vector MuNXKan QL-ELE-00-002 215 bp View
AY962288.1 nt Low threshold vector pLTSUB-302, co... 4719 bp Low threshold vector pLTSUB-302 QL-ELE-00-002 215 bp View
AY995144.1 nt Binary vector pBin19 35S YFP-attR, ... 16662 bp Binary vector pBin19 35S YFP-attR QL-ELE-00-002 215 bp View
AY995145.1 nt Binary vector pBin19 35S attR-YFP, ... 16537 bp Binary vector pBin19 35S attR-YFP QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.