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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN948551.1 emblreltgn Mus musculus targeted KO-first, con... 39488 bp Mus musculus QL-ELE-00-002 215 bp View
AY028413.1 nt YTT vector B, complete sequence. 5830 bp YTT vector B QL-ELE-00-002 215 bp View
AY028415.1 nt YTT vector D, complete sequence. 5842 bp YTT vector D QL-ELE-00-002 215 bp View
AF113968.2 nt Cloning vector pLXRN, complete sequ... 6094 bp Cloning vector pLXRN QL-ELE-00-002 215 bp View
AY029367.1 nt Synthetic construct his-tagged huma... 6849 bp synthetic construct QL-ELE-00-002 215 bp View
AJ298137.1 nt Arabidopsis thaliana eIF-4A1 gene f... 11509 bp Arabidopsis thaliana QL-ELE-00-002 215 bp View
AF396261.1 nt Cloning vector pFB-Neo-LacZ, comple... 9609 bp Cloning vector pFB-Neo-LacZ QL-ELE-00-002 215 bp View
AF397196.1 nt Retrofitting vector pRetroES, compl... 6293 bp Retrofitting vector pRetroES QL-ELE-00-002 215 bp View
AF346624.1 nt RAGE vector pRIG1, complete sequence. 6836 bp RAGE vector pRIG1 QL-ELE-00-002 215 bp View
AY072039.1 nt Expression vector pANT1201, complet... 6607 bp Expression vector pANT1201 QL-ELE-00-002 215 bp View
AL671256.1 nt Trypanosoma brucei VO2 VSG expressi... 137759 bp Trypanosoma brucei QL-ELE-00-002 215 bp View
AF524827.1 nt P-element cloning system vector pPU... 1833 bp P-element cloning system vector pPUNIdelta QL-ELE-00-002 215 bp View
AJ510158.1 nt Cloning vector pDXA-CFP 6791 bp Cloning vector pDXA-CFP QL-ELE-00-002 215 bp View
AJ510159.1 nt Cloning vector pDXA-yFP 6791 bp Cloning vector pDXA-yFP QL-ELE-00-002 215 bp View
AJ510160.1 nt Cloning vector pDXA-CFP-MCS 6827 bp Cloning vector pDXA-CFP-MCS QL-ELE-00-002 215 bp View
AJ510161.1 nt Cloning vector pDXA-YFP-MCS 6827 bp Cloning vector pDXA-YFP-MCS QL-ELE-00-002 215 bp View
AJ510162.1 nt Cloning vector pDXA-YFP-NotI 6842 bp Cloning vector pDXA-YFP-NotI QL-ELE-00-002 215 bp View
AJ510163.1 nt Cloning vector pDXA-MCS-YFP 6833 bp Cloning vector pDXA-MCS-YFP QL-ELE-00-002 215 bp View
AJ510165.1 nt Cloning vector pDXA-3FLAG 6110 bp Cloning vector pDXA-3FLAG QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.