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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
M28248.1 nt Retroviral vector pLXSN, complete s... 5874 bp Retroviral vector pLXSN QL-ELE-00-002 215 bp View
U00800.1 nt Cloning vector Pk184, complete sequ... 2432 bp Cloning vector Pk184 QL-ELE-00-002 215 bp View
U32991.1 nt Escherichia coli mini-Tn5 kanamycin... 2356 bp Escherichia coli QL-ELE-00-002 215 bp View
JN948547.1 emblreltgn Mus musculus targeted KO-first, con... 38418 bp Mus musculus QL-ELE-00-002 215 bp View
Y09894.1 nt Suicide plasmid vector pSG76-K DNA 1842 bp unidentified cloning vector QL-ELE-00-002 215 bp View
Y09897.1 nt Suicide plasmid vector pST76-K DNA 3356 bp unidentified cloning vector QL-ELE-00-002 215 bp View
U90436.1 nt Synthetic transposon Tn5lac, comple... 12366 bp synthetic construct QL-ELE-00-002 215 bp View
U12639.1 nt GUS gene fusion vector pBI101 T-DNA... 5349 bp Cloning vector pBI101 QL-ELE-00-002 215 bp View
AB003468.1 nt Cloning vector pAP3neo DNA, complet... 5350 bp Cloning vector pAP3neo QL-ELE-00-002 215 bp View
AF005420.1 nt Expression vector pRIBOTEX, complet... 6024 bp Expression vector pRIBOTEX QL-ELE-00-002 215 bp View
AF080389.1 nt Minitransposon mTn5-Nm, complete se... 1107 bp synthetic construct QL-ELE-00-002 215 bp View
AF080390.1 nt Minitransposon mTn5-GNm, complete s... 3046 bp synthetic construct QL-ELE-00-002 215 bp View
JN948548.1 emblreltgn Mus musculus targeted KO-first, con... 38259 bp Mus musculus QL-ELE-00-002 215 bp View
U64449.2 nt Cloning vector pOPRSVIMCS from Lacs... 5647 bp Cloning vector pOPRSVIMCS QL-ELE-00-002 215 bp View
AF172934.1 nt Integration vector pLOI2224, comple... 1929 bp Integration vector pLOI2224 QL-ELE-00-002 215 bp View
AF172937.1 nt Integration vector pLOI2227, comple... 3443 bp Integration vector pLOI2227 QL-ELE-00-002 215 bp View
AF237704.1 nt Cloning vector Lorist6Xh, complete ... 6676 bp Cloning vector Lorist6Xh QL-ELE-00-002 215 bp View
U47120.2 nt Cloning vector pCI-neo, mammalian e... 5472 bp Cloning vector pCI-neo QL-ELE-00-002 215 bp View
AF270470.1 nt Cloning vector pBIG, complete sequence. 11335 bp Cloning vector pBIG QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.