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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY781407.1 nt Synthetic construct transposon mini... 2037 bp synthetic construct QL-ELE-00-002 215 bp View
JN947675.1 nt Mus musculus targeted non-condition... 37944 bp Mus musculus QL-ELE-00-002 215 bp View
KJ500179.1 nt Integration vector pZR606, complete... 8411 bp Integration vector pZR606 QL-ELE-00-002 215 bp View
AY952935.1 nt Expression vector pFNK-101, complet... 4099 bp Expression vector pFNK-101 QL-ELE-00-002 215 bp View
AY952936.1 nt Expression vector pINV-110, complet... 4887 bp Expression vector pINV-110 QL-ELE-00-002 215 bp View
AY622810.1 nt Cloning shuttle vector pSCR119, com... 8786 bp Cloning shuttle vector pSCR119 QL-ELE-00-002 215 bp View
AY622811.1 nt Shuttle reporter vector pSUN119, co... 9816 bp Shuttle reporter vector pSUN119 QL-ELE-00-002 215 bp View
JN947676.1 nt Mus musculus targeted non-condition... 36541 bp Mus musculus QL-ELE-00-002 215 bp View
DQ172900.1 nt Transfection vector pC-PTP-NEO, com... 6662 bp Transfection vector pC-PTP-NEO QL-ELE-00-002 215 bp View
DQ225746.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NA QL-ELE-00-002 215 bp View
DQ225747.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NB QL-ELE-00-002 215 bp View
JN948543.1 emblreltgn Mus musculus targeted KO-first, con... 37984 bp Mus musculus QL-ELE-00-002 215 bp View
JN948544.1 emblreltgn Mus musculus targeted non-condition... 38784 bp Mus musculus QL-ELE-00-002 215 bp View
JN948545.1 emblreltgn Mus musculus targeted KO-first, con... 37865 bp Mus musculus QL-ELE-00-002 215 bp View
JN948546.1 emblreltgn Mus musculus targeted KO-first, con... 38162 bp Mus musculus QL-ELE-00-002 215 bp View
X64335.1 nt E.coli plasmid pMM234 DNA 9080 bp Escherichia coli QL-ELE-00-002 215 bp View
V00618.1 nt Transposon Tn5 fragment encoding ne... 1300 bp Escherichia coli QL-ELE-00-002 215 bp View
M28245.1 nt Retroviral vector pLN, complete seq... 5464 bp Retroviral vector pLN QL-ELE-00-002 215 bp View
M28246.1 nt Retroviral vector pLNSX, complete s... 6149 bp Retroviral vector pLNSX QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.