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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
Y18316.1 nt Cloning vector pKG1M 6074 bp Cloning vector pKG1M QL-ELE-00-002 215 bp View
AF184978.1 nt Binary vector pCLD04541, complete s... 27608 bp Binary vector pCLD04541 QL-ELE-00-002 215 bp View
AJ133194.1 nt Shuttle vector pMJ-A (Corynebacteri... 5216 bp Shuttle vector pMJ-A QL-ELE-00-002 215 bp View
JN948534.1 emblreltgn Mus musculus targeted KO-first, con... 39552 bp Mus musculus QL-ELE-00-002 215 bp View
JN948535.1 emblreltgn Mus musculus targeted non-condition... 39087 bp Mus musculus QL-ELE-00-002 215 bp View
JN948536.1 emblreltgn Mus musculus targeted KO-first, con... 39039 bp Mus musculus QL-ELE-00-002 215 bp View
JN948537.1 emblreltgn Mus musculus targeted non-condition... 38209 bp Mus musculus QL-ELE-00-002 215 bp View
JN948538.1 emblreltgn Mus musculus targeted non-condition... 38403 bp Mus musculus QL-ELE-00-002 215 bp View
AF234314.1 nt Binary vector pCAMBIA-2201, complet... 11785 bp Binary vector pCAMBIA-2201 QL-ELE-00-002 215 bp View
AF234316.1 nt Binary vector pCAMBIA-2301, complet... 11633 bp Binary vector pCAMBIA-2301 QL-ELE-00-002 215 bp View
AB041928.1 nt Retroviral vector pCXneo DNA, compl... 6248 bp Retroviral vector pCXneo QL-ELE-00-002 215 bp View
DQ789393.1 nt Synthetic construct neomycin phosph... 2488 bp synthetic construct QL-ELE-00-002 215 bp View
AF264723.1 nt Cloning Vector pACT, complete sequence. 5566 bp Cloning Vector pACT QL-ELE-00-002 215 bp View
AJ302087.1 nt Synthetic construct for alkane-resp... 7675 bp synthetic construct QL-ELE-00-002 215 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-002 215 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-002 215 bp View
JN948539.1 emblreltgn Mus musculus targeted non-condition... 39043 bp Mus musculus QL-ELE-00-002 215 bp View
DQ487155.1 nt Flexi vector pF5A CMV-neo, complete... 5591 bp Flexi vector pF5A CMV-neo QL-ELE-00-002 215 bp View
DQ487156.1 nt Flexi vector pF5K CMV-neo, complete... 4594 bp Flexi vector pF5K CMV-neo QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.