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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HV202551.1 emblrelpat JP 2001017187-A/2: Hepatitis C viru... 8637 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202552.1 emblrelpat JP 2001017187-A/3: Hepatitis C viru... 8001 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202553.1 emblrelpat JP 2001017187-A/4: Hepatitis C viru... 7989 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202555.1 emblrelpat JP 2001017187-A/6: Hepatitis C viru... 8001 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202556.1 emblrelpat JP 2001017187-A/7: Hepatitis C viru... 11076 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202557.1 emblrelpat JP 2001017187-A/8: Hepatitis C viru... 8001 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202558.1 emblrelpat JP 2001017187-A/9: Hepatitis C viru... 11076 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202559.1 emblrelpat JP 2001017187-A/10: Hepatitis C vir... 8001 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HV202560.1 emblrelpat JP 2001017187-A/11: Hepatitis C vir... 11076 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HW121695.1 emblrelpat WO 2013031956-A/14: Nucleic acid co... 7995 bp Hepacivirus hominis QL-ELE-00-002 215 bp View
HZ385862.1 emblrelpat JP 2015522581-A/2: COMPLEXES OF CYT... 5156 bp Human betaherpesvirus 5 QL-ELE-00-002 215 bp View
HZ385863.1 emblrelpat JP 2015522581-A/3: COMPLEXES OF CYT... 4835 bp Human betaherpesvirus 5 QL-ELE-00-002 215 bp View
HZ385864.1 emblrelpat JP 2015522581-A/4: COMPLEXES OF CYT... 4964 bp Human betaherpesvirus 5 QL-ELE-00-002 215 bp View
HZ385865.1 emblrelpat JP 2015522581-A/5: COMPLEXES OF CYT... 4709 bp Human betaherpesvirus 5 QL-ELE-00-002 215 bp View
JA662462.1 emblrelpat Sequence 17 from Patent EP2385119. 4961 bp Respiratory syncytial virus QL-ELE-00-002 215 bp View
JA662463.1 emblrelpat Sequence 18 from Patent EP2385119. 5356 bp Respiratory syncytial virus QL-ELE-00-002 215 bp View
JA662468.1 emblrelpat Sequence 23 from Patent EP2385119. 4034 bp Respiratory syncytial virus QL-ELE-00-002 215 bp View
JA662469.1 emblrelpat Sequence 24 from Patent EP2385119. 4031 bp Respiratory syncytial virus QL-ELE-00-002 215 bp View
JB980447.1 emblrelpat Sequence 25 from Patent WO2014005959. 5156 bp Human betaherpesvirus 5 QL-ELE-00-002 215 bp View
JB980449.1 emblrelpat Sequence 27 from Patent WO2014005959. 4964 bp Human betaherpesvirus 5 QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.