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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN964153.1 emblreltgn Mus musculus targeted non-condition... 39515 bp Mus musculus QL-ELE-00-002 215 bp View
JN964160.1 emblreltgn Mus musculus targeted KO-first, con... 38576 bp Mus musculus QL-ELE-00-002 215 bp View
JN964167.1 emblreltgn Mus musculus targeted KO-first, con... 39153 bp Mus musculus QL-ELE-00-002 215 bp View
JN964174.1 emblreltgn Mus musculus targeted KO-first, con... 38004 bp Mus musculus QL-ELE-00-002 215 bp View
CP025340.1 nt Salmonella enterica subsp. enterica... 220023 bp Salmonella enterica subsp. enterica serovar Typhimurium QL-ELE-00-002 215 bp View
LT985287.1 nt Escherichia coli strain RPC3 genome... 49251 bp Escherichia coli QL-ELE-00-002 215 bp View
MF479729.1 nt Ti plasmid binary vector pGSh16.101... 16639 bp Ti plasmid binary vector pGSh16.1012 QL-ELE-00-002 215 bp View
MG437013.1 nt Expression vector pLeo620, complete... 7323 bp Expression vector pLeo620 QL-ELE-00-002 215 bp View
MG437021.1 nt Expression vector pLeo643, complete... 7407 bp Expression vector pLeo643 QL-ELE-00-002 215 bp View
MG437030.1 nt Expression vector pLeo690, complete... 7847 bp Expression vector pLeo690 QL-ELE-00-002 215 bp View
MG437040.1 nt Expression vector pTS1002, complete... 7308 bp Expression vector pTS1002 QL-ELE-00-002 215 bp View
MG437048.1 nt Expression vector pTS1012, complete... 5778 bp Expression vector pTS1012 QL-ELE-00-002 215 bp View
MG760357.1 nt Cloning vector pVIR-Nick, complete ... 19084 bp Cloning vector pVIR-Nick QL-ELE-00-002 215 bp View
MG197491.1 nt Escherichia coli strain FKU92 plasm... 109185 bp Escherichia coli QL-ELE-00-002 215 bp View
MH287085.1 nt Escherichia coli strain F2_12B plas... 288288 bp Escherichia coli QL-ELE-00-002 215 bp View
MH170480.1 nt Cloning vector pR6Kamp-LAP(GFP), co... 4232 bp Cloning vector pR6Kamp-LAP(GFP) QL-ELE-00-002 215 bp View
CP033632.1 nt Escherichia coli isolate ECCNB12-2 ... 147451 bp Escherichia coli QL-ELE-00-002 215 bp View
MK753227.1 nt Escherichia coli str. K-12 substr. ... 4970 bp Escherichia coli str. K-12 substr. MG1655 QL-ELE-00-002 215 bp View
MK176927.1 nt Cloning vector pLSRB2, complete seq... 9381 bp Cloning vector pLSRB2 QL-ELE-00-002 215 bp View
MK448012.1 nt Cloning vector pCHX50, complete seq... 7632 bp Cloning vector pCHX50 QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.