Amplicon details

Amplicon:

215 bp
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AP022031.1 nt Escherichia coli plasmid pWP3-S18-E... 76037 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057331.1 nt Klebsiella oxytoca strain RHB30-C02... 271498 bp Klebsiella oxytoca QL-ELE-00-002 215 bp View
MT127263.1 nt Cloning vector O1(core)_Reporter, c... 4235 bp Cloning vector O1(core)_Reporter QL-ELE-00-002 215 bp View
MT127271.1 nt Cloning vector Otta(core)_Reporter,... 4235 bp Cloning vector Otta(core)_Reporter QL-ELE-00-002 215 bp View
CP033383.2 nt Salmonella enterica subsp. enterica... 34764 bp Salmonella enterica subsp. enterica QL-ELE-00-002 215 bp View
MT180300.1 nt Cloning vector pTcFlagN-CO 2.0, com... 7428 bp Cloning vector pTcFlagN-CO 2.0 QL-ELE-00-002 215 bp View
MT180308.1 nt Cloning vector pTcTy1N-CO 2.0, comp... 7392 bp Cloning vector pTcTy1N-CO 2.0 QL-ELE-00-002 215 bp View
MT024575.1 nt Binary vector pRATIO2214, complete ... 14074 bp Binary vector pRATIO2214 QL-ELE-00-002 215 bp View
JN960217.1 nt Mus musculus targeted non-condition... 38053 bp Mus musculus QL-ELE-00-002 215 bp View
MT966990.1 nt Cloning vector pGluc2-Nter-ERI1-R10... 6861 bp Cloning vector pGluc2-Nter-ERI1-R105A QL-ELE-00-002 215 bp View
CP061051.1 nt Salmonella enterica subsp. enterica... 81781 bp Salmonella enterica subsp. enterica serovar Typhimurium QL-ELE-00-002 215 bp View
JN960182.1 nt Mus musculus targeted non-condition... 38301 bp Mus musculus QL-ELE-00-002 215 bp View
JN960189.1 nt Mus musculus targeted KO-first, con... 37996 bp Mus musculus QL-ELE-00-002 215 bp View
JN960196.1 nt Mus musculus targeted non-condition... 38470 bp Mus musculus QL-ELE-00-002 215 bp View
JN960203.1 nt Mus musculus targeted non-condition... 38656 bp Mus musculus QL-ELE-00-002 215 bp View
JN960210.1 nt Mus musculus targeted non-condition... 38277 bp Mus musculus QL-ELE-00-002 215 bp View
JN960224.1 nt Mus musculus targeted non-condition... 38368 bp Mus musculus QL-ELE-00-002 215 bp View
JN960231.1 nt Mus musculus targeted non-condition... 38005 bp Mus musculus QL-ELE-00-002 215 bp View
JN960238.1 nt Mus musculus targeted non-condition... 38108 bp Mus musculus QL-ELE-00-002 215 bp View
JN960245.1 nt Mus musculus targeted non-condition... 37932 bp Mus musculus QL-ELE-00-002 215 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.