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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
CP068279.1 nt Escherichia coli strain CY708 chrom... 4625856 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068279.1 nt Escherichia coli strain CY708 chrom... 4625856 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068281.1 nt Escherichia coli strain CY706 chrom... 4669770 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068281.1 nt Escherichia coli strain CY706 chrom... 4669770 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068281.1 nt Escherichia coli strain CY706 chrom... 4669770 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068281.1 nt Escherichia coli strain CY706 chrom... 4669770 bp Escherichia coli QL-ELE-00-002 215 bp View
PP125219.1 nt Vector pHK208, complete sequence. 4598 bp Vector pHK208 QL-ELE-00-002 215 bp View
CP068283.1 nt Escherichia coli strain CY598 chrom... 4688863 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068283.1 nt Escherichia coli strain CY598 chrom... 4688863 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068283.1 nt Escherichia coli strain CY598 chrom... 4688863 bp Escherichia coli QL-ELE-00-002 215 bp View
CP068283.1 nt Escherichia coli strain CY598 chrom... 4688863 bp Escherichia coli QL-ELE-00-002 215 bp View
PP125227.1 nt Vector pHK216, complete sequence. 4755 bp Vector pHK216 QL-ELE-00-002 215 bp View
PP125235.1 nt Vector pHK224, complete sequence. 4714 bp Vector pHK224 QL-ELE-00-002 215 bp View
PP125251.1 nt Vector pHK406, complete sequence. 5139 bp Vector pHK406 QL-ELE-00-002 215 bp View
PP125259.1 nt Vector pHK414, complete sequence. 5152 bp Vector pHK414 QL-ELE-00-002 215 bp View
PP125270.1 nt Vector pHK603, complete sequence. 5220 bp Vector pHK603 QL-ELE-00-002 215 bp View
MZ420731.1 nt Cloning vector pYI39, complete sequ... 7475 bp Cloning vector pYI39 QL-ELE-00-002 215 bp View
MZ420732.1 nt Cloning vector pYI43, complete sequ... 8767 bp Cloning vector pYI43 QL-ELE-00-002 215 bp View
MZ420733.1 nt Cloning vector pYI46, complete sequ... 8395 bp Cloning vector pYI46 QL-ELE-00-002 215 bp View
KU321583.1 nt Escherichia coli strain E80 plasmid... 138718 bp Escherichia coli QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.