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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
CP100150.1 nt Burkholderia glumae strain BGR82S c... 3912005 bp Burkholderia glumae QL-ELE-00-002 215 bp View
CP100162.1 nt Burkholderia glumae strain BGR57S c... 3912005 bp Burkholderia glumae QL-ELE-00-002 215 bp View
CP100168.1 nt Burkholderia glumae strain BGR59S c... 3912005 bp Burkholderia glumae QL-ELE-00-002 215 bp View
CP100204.1 nt Burkholderia glumae strain PW30RS c... 2872561 bp Burkholderia glumae QL-ELE-00-002 215 bp View
CP100268.1 nt Burkholderia glumae strain BGR68S c... 3912005 bp Burkholderia glumae QL-ELE-00-002 215 bp View
CP100274.1 nt Burkholderia glumae strain BGR73S c... 3912005 bp Burkholderia glumae QL-ELE-00-002 215 bp View
OM223089.1 nt Plant Binary vector pYL1300N-UNiE, ... 9131 bp unidentified QL-ELE-00-002 215 bp View
ON094067.1 nt Vector pPR3, complete sequence. 15534 bp unidentified QL-ELE-00-002 215 bp View
CP102828.1 nt Salmonella enterica subsp. enterica... 237848 bp Salmonella enterica subsp. enterica serovar Indiana QL-ELE-00-002 215 bp View
JB036134.1 emblrelpat Sequence 118 from Patent EP2527455. 11135 bp synthetic construct QL-ELE-00-002 215 bp View
ON681666.1 nt Vector pJH6, complete sequence. 9039 bp Vector pJH6 QL-ELE-00-002 215 bp View
ON681668.1 nt Vector pLS15, complete sequence. 7679 bp Vector pLS15 QL-ELE-00-002 215 bp View
ON681669.1 nt Vector pTS379, complete sequence. 7840 bp Vector pTS379 QL-ELE-00-002 215 bp View
ON681670.1 nt Vector pTS380-B4, complete sequence. 7412 bp Vector pTS380-B4 QL-ELE-00-002 215 bp View
ON681672.1 nt Vector pTS441, complete sequence. 6255 bp Vector pTS441 QL-ELE-00-002 215 bp View
ON681673.1 nt Vector pTS810, complete sequence. 6506 bp Vector pTS810 QL-ELE-00-002 215 bp View
ON681674.1 nt Vector pTS824, complete sequence. 6612 bp Vector pTS824 QL-ELE-00-002 215 bp View
ON681676.1 nt Vector pTS863, complete sequence. 7232 bp Vector pTS863 QL-ELE-00-002 215 bp View
ON681677.1 nt Vector pTS864, complete sequence. 7232 bp Vector pTS864 QL-ELE-00-002 215 bp View
ON681678.1 nt Vector pTS865, complete sequence. 7622 bp Vector pTS865 QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.