European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN964677.1 nt Mus musculus targeted non-condition... 38128 bp Mus musculus QL-ELE-00-002 215 bp View
JN159854.1 nt Cloning vector pCLacZGT, complete s... 8233 bp Cloning vector pCLacZGT QL-ELE-00-002 215 bp View
JN874482.1 nt Cloning vector pHUGE-MtNFS, complet... 91916 bp Cloning vector pHUGE-MtNFS QL-ELE-00-002 215 bp View
JN596083.1 nt Cloning vector pTcR-GA-Neo-plus, co... 3770 bp Cloning vector pTcR-GA-Neo-plus QL-ELE-00-002 215 bp View
AB673340.1 nt Gene-trapping transposon vector pUP... 9296 bp Gene-trapping transposon vector pUPATrap-TMtt-10 QL-ELE-00-002 215 bp View
AB673355.1 nt Gene-trapping transposon vector pUP... 9869 bp Gene-trapping transposon vector pUPATrap-TMat-10 QL-ELE-00-002 215 bp View
JN983042.1 nt Salmonella enterica subsp. enterica... 227608 bp Salmonella enterica subsp. enterica serovar Heidelberg QL-ELE-00-002 215 bp View
JQ664667.1 nt Riemerella anatipestifer strain GN2... 717 bp Riemerella anatipestifer QL-ELE-00-002 215 bp View
JQ664680.1 nt Riemerella anatipestifer strain X21... 717 bp Riemerella anatipestifer QL-ELE-00-002 215 bp View
JQ733910.1 nt Plant transformation vector pCAM-RS... 12001 bp Plant transformation vector pCAM-RSs1 QL-ELE-00-002 215 bp View
JQ436537.1 nt Tn7 transposase expression vector p... 11151 bp Tn7 transposase expression vector pSTNSK-Cm QL-ELE-00-002 215 bp View
CP051311.1 nt Salmonella enterica subsp. enterica... 239428 bp Salmonella enterica subsp. enterica serovar Heidelberg QL-ELE-00-002 215 bp View
AB713996.1 nt Donor vector pZErOTM7ZeoGFPattB DNA... 4789 bp Donor vector pZErOTM7ZeoGFPattB QL-ELE-00-002 215 bp View
JX181779.1 nt URT reporter vector pKP55-M, comple... 17628 bp URT reporter vector pKP55-M QL-ELE-00-002 215 bp View
JX155238.1 nt Cloning vector DH6-78, complete seq... 5007 bp Cloning vector DH6-78 QL-ELE-00-002 215 bp View
JX017375.1 nt PiggyBac_helper_T7_transposase vect... 5567 bp piggyBac-helper T7 transposase vector pPV257 QL-ELE-00-002 215 bp View
JX885593.1 nt Cloning vector pKOS6b, complete seq... 6689 bp Cloning vector pKOS6b QL-ELE-00-002 215 bp View
JQ278005.1 nt 1-butene synthase expression constr... 13274 bp 1-butene synthase expression construct pBbS5k-bs1 QL-ELE-00-002 215 bp View
MW132111.1 nt Cloning vector pHyp5 kanamycin resi... 7318 bp Cloning vector pHyp5 QL-ELE-00-002 215 bp View
JQ309938.1 nt Brassica napus clone TopasR right b... 1698 bp Brassica napus QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.