Amplicon details

Amplicon:

215 bp
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT086575.1 nt Expression vector pMT-5, complete s... 7230 bp Expression vector pMT-5 QL-ELE-00-002 215 bp View
MT086576.1 nt Expression vector pMT-6, complete s... 7014 bp Expression vector pMT-6 QL-ELE-00-002 215 bp View
JN961674.1 nt Mus musculus targeted KO-first, con... 37969 bp Mus musculus QL-ELE-00-002 215 bp View
MT407546.1 nt Escherichia coli strain GZB8C57M pl... 116791 bp Escherichia coli QL-ELE-00-002 215 bp View
CP055676.1 nt Escherichia fergusonii strain RHB28... 282651 bp Escherichia fergusonii QL-ELE-00-002 215 bp View
CP055670.1 nt Escherichia coli strain RHB30-C19 p... 187659 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057282.1 nt Escherichia coli strain RHB30-C17 p... 196445 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057312.1 nt Escherichia fergusonii strain RHB30... 277375 bp Escherichia fergusonii QL-ELE-00-002 215 bp View
CP057358.1 nt Escherichia fergusonii strain RHB28... 285327 bp Escherichia fergusonii QL-ELE-00-002 215 bp View
CP057726.1 nt Escherichia coli strain RHB16-C19 p... 285423 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057730.1 nt Escherichia coli strain RHB16-C14 p... 266854 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057732.1 nt Escherichia coli strain RHB16-C13 p... 280872 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057739.1 nt Escherichia coli strain RHB16-C11 p... 280872 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057752.1 nt Escherichia coli strain RHB16-C08 p... 280872 bp Escherichia coli QL-ELE-00-002 215 bp View
CP057760.1 nt Escherichia coli strain RHB16-C07 p... 280872 bp Escherichia coli QL-ELE-00-002 215 bp View
CP055946.1 nt Escherichia coli strain RHB30-C20 p... 196445 bp Escherichia coli QL-ELE-00-002 215 bp View
MT127260.1 nt Cloning vector NAND_Reporter, compl... 5173 bp Cloning vector NAND_Reporter QL-ELE-00-002 215 bp View
MT127261.1 nt Cloning vector NORcp_Reporter, comp... 4360 bp Cloning vector NORcp_Reporter QL-ELE-00-002 215 bp View
MT127262.1 nt Cloning vector XNOR_Reporter, compl... 5173 bp Cloning vector XNOR_Reporter QL-ELE-00-002 215 bp View
MT127264.1 nt Cloning vector Oagg(core)_Reporter,... 4235 bp Cloning vector Oagg(core)_Reporter QL-ELE-00-002 215 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.