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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HM771697.1 nt Cloning vector EN.GFP, complete seq... 10655 bp Cloning vector EN.GFP QL-ELE-00-002 215 bp View
HM771698.1 nt Cloning vector EN.CFP, complete seq... 10658 bp Cloning vector EN.CFP QL-ELE-00-002 215 bp View
HM771699.1 nt Cloning vector EN.YFP, complete seq... 10658 bp Cloning vector EN.YFP QL-ELE-00-002 215 bp View
HM771700.1 nt Cloning vector EN.Apple, complete s... 10649 bp Cloning vector EN.Apple QL-ELE-00-002 215 bp View
HM771701.1 nt Cloning vector NonEN.CFP, complete ... 10607 bp Cloning vector NonEN.CFP QL-ELE-00-002 215 bp View
HM771703.1 nt Cloning vector EN.CFP.SV40, complet... 9966 bp Cloning vector EN.CFP.SV40 QL-ELE-00-002 215 bp View
JN122283.1 nt Flexi vector pFC27A HaloTag CMV-neo... 6524 bp Flexi vector pFC27A HaloTag CMV-neo QL-ELE-00-002 215 bp View
JN122284.1 nt Flexi vector pFC27K HaloTag CMV-neo... 5527 bp Flexi vector pFC27K HaloTag CMV-neo QL-ELE-00-002 215 bp View
JN129497.1 nt Flexi vector pFN28A HaloTag(R) CMV-... 6532 bp Flexi vector pFN28A HaloTag(R) CMV-neo QL-ELE-00-002 215 bp View
JN129498.1 nt Flexi vector pFN28K HaloTag(R) CMV-... 5535 bp Flexi vector pFN28K HaloTag(R) CMV-neo QL-ELE-00-002 215 bp View
JN204880.1 nt Biobrick cloning vector BBa_J96011,... 3988 bp Biobrick cloning vector BBa_J96011 QL-ELE-00-002 215 bp View
JN255744.1 nt Synthetic construct, complete sequence. 200728 bp synthetic construct QL-ELE-00-002 215 bp View
JN000001.1 nt Expression vector pLNHX_cHS4_650, c... 5956 bp Expression vector pLNHX_cHS4_650 QL-ELE-00-002 215 bp View
JF804976.1 nt Gene trapping and targeting vector ... 800 bp Gene trapping and targeting vector pLTM330 QL-ELE-00-002 215 bp View
KR061299.1 nt Cloning vector pFL8, complete sequence. 8921 bp Cloning vector pFL8 QL-ELE-00-002 215 bp View
JF811682.1 nt Binary vector pPIPRA560, complete s... 9273 bp Binary vector pPIPRA560 QL-ELE-00-002 215 bp View
JF811683.1 nt Binary vector pPIPRA561, complete s... 10636 bp Binary vector pPIPRA561 QL-ELE-00-002 215 bp View
JN948661.1 emblreltgn Mus musculus targeted KO-first, con... 38597 bp Mus musculus QL-ELE-00-002 215 bp View
JF920304.1 nt HaloTag CMV-neo vector pHTN, comple... 6143 bp HaloTag CMV-neo vector pHTN QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.