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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HQ698853.1 nt Cloning vector pSOL8DC3, complete s... 10836 bp Cloning vector pSOL8DC3 QL-ELE-00-002 215 bp View
HQ699533.1 nt Cloning vector pCASP1::NLS:GFP:GUS,... 12379 bp Cloning vector pCASP1::NLS:GFP:GUS QL-ELE-00-002 215 bp View
HQ699534.1 nt Cloning vector pCASP2::NLS:GFP:GUS,... 11882 bp Cloning vector pCASP2::NLS:GFP:GUS QL-ELE-00-002 215 bp View
HQ699535.1 nt Cloning vector pCASP4::NLS:GFP:GUS,... 13153 bp Cloning vector pCASP4::NLS:GFP:GUS QL-ELE-00-002 215 bp View
HQ699536.1 nt Cloning vector pCASP5::CASP5:GFP, c... 11043 bp Cloning vector pCASP5::CASP5:GFP QL-ELE-00-002 215 bp View
HQ699538.1 nt Cloning vector pCASP3::CASP3:GFP, c... 11383 bp Cloning vector pCASP3::CASP3:GFP QL-ELE-00-002 215 bp View
HQ699539.1 nt Cloning vector pCASP2::CASP2:GFP, c... 10842 bp Cloning vector pCASP2::CASP2:GFP QL-ELE-00-002 215 bp View
HQ699540.1 nt Cloning vector p35S::CASP4:GFP, com... 11039 bp Cloning vector p35S::CASP4:GFP QL-ELE-00-002 215 bp View
HQ699541.1 nt Cloning vector p35S::CASP5:GFP, com... 11008 bp Cloning vector p35S::CASP5:GFP QL-ELE-00-002 215 bp View
HQ699542.1 nt Cloning vector p35S::CASP1:GFP, com... 11181 bp Cloning vector p35S::CASP1:GFP QL-ELE-00-002 215 bp View
HQ699543.1 nt Cloning vector p35S::CASP3:GFP, com... 11533 bp Cloning vector p35S::CASP3:GFP QL-ELE-00-002 215 bp View
HQ699544.1 nt Cloning vector p35S::CASP2:GFP, com... 11046 bp Cloning vector p35S::CASP2:GFP QL-ELE-00-002 215 bp View
HQ699545.1 nt Cloning vector pCASP1::CASP1:mTurqu... 11150 bp Cloning vector pCASP1::CASP1:mTurquoise QL-ELE-00-002 215 bp View
HQ416707.1 nt Cloning vector pEGPF-N2-NRSE4x, com... 5121 bp Cloning vector pEGPF-N2-NRSE4x QL-ELE-00-002 215 bp View
JN128952.1 nt Shuttle vector pSC-R1LambdaR2, comp... 8092 bp Shuttle vector pSC-R1LambdaR2 QL-ELE-00-002 215 bp View
JN195814.1 nt Cloning vector pHPmK3, complete seq... 4908 bp Cloning vector pHPmK3 QL-ELE-00-002 215 bp View
JN195816.1 nt Cloning vector pMA_F3RoxNeoRoxLoxPF... 4388 bp Cloning vector pMA_F3RoxNeoRoxLoxPFR QL-ELE-00-002 215 bp View
JN387044.1 nt Recombination vector pAdHTS, comple... 34579 bp Recombination vector pAdHTS QL-ELE-00-002 215 bp View
HQ683722.1 nt Cloning vector TNN, complete sequence. 8907 bp Cloning vector TNN QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.