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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947776.1 nt Mus musculus targeted non-condition... 38807 bp Mus musculus QL-ELE-00-002 215 bp View
JN947777.1 nt Mus musculus targeted non-condition... 39250 bp Mus musculus QL-ELE-00-002 215 bp View
HM047294.1 nt Binary vector pBI121-ELEMENTS, comp... 16746 bp Binary vector pBI121-ELEMENTS QL-ELE-00-002 215 bp View
HM588138.1 nt Targeting vector R26-Stop-HA3-ICA51... 9651 bp Targeting vector R26-Stop-HA3-ICA512-CCF QL-ELE-00-002 215 bp View
HM357235.1 nt Knock-in vector FBDki, complete seq... 10504 bp Knock-in vector FBDki QL-ELE-00-002 215 bp View
JN948645.1 emblreltgn Mus musculus targeted KO-first, con... 38071 bp Mus musculus QL-ELE-00-002 215 bp View
GU074524.1 nt Cloning vector pKaKa1, complete seq... 9633 bp Cloning vector pKaKa1 QL-ELE-00-002 215 bp View
HM066935.1 nt Nicotiana tabacum transgenic chloro... 17958 bp Nicotiana tabacum QL-ELE-00-002 215 bp View
HM162840.2 nt Cloning vector pTcYFPN, complete se... 7584 bp Cloning vector pTcYFPN QL-ELE-00-002 215 bp View
HM162841.2 nt Cloning vector pTcMYCN, complete se... 6906 bp Cloning vector pTcMYCN QL-ELE-00-002 215 bp View
HM162842.2 nt Cloning vector pTcTAPN, complete se... 7515 bp Cloning vector pTcTAPN QL-ELE-00-002 215 bp View
HM162843.2 nt Cloning vector pTcGFPN, complete se... 7584 bp Cloning vector pTcGFPN QL-ELE-00-002 215 bp View
HM162845.2 nt Cloning vector pTcCFPN, complete se... 7584 bp Cloning vector pTcCFPN QL-ELE-00-002 215 bp View
JN948646.1 emblreltgn Mus musculus targeted KO-first, con... 38839 bp Mus musculus QL-ELE-00-002 215 bp View
HQ585611.1 nt Shuttle vector pYS1R1, complete seq... 4730 bp Shuttle vector pYS1R1 QL-ELE-00-002 215 bp View
HQ456315.1 nt Retroviral Tet-shRNA expression vec... 9219 bp Retroviral Tet-shRNA expression vector TRMPV-Neo QL-ELE-00-002 215 bp View
HQ456319.1 nt Retroviral Tet-shRNA expression vec... 9105 bp Retroviral Tet-shRNA expression vector TtTMPV-Neo QL-ELE-00-002 215 bp View
JN947778.1 nt Mus musculus targeted non-condition... 38019 bp Mus musculus QL-ELE-00-002 215 bp View
JN947779.1 nt Mus musculus targeted KO-first, con... 39459 bp Mus musculus QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.