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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN948643.1 emblreltgn Mus musculus targeted non-condition... 37964 bp Mus musculus QL-ELE-00-002 215 bp View
GQ870263.1 nt Plant RNAi vector pRNAi-LIC, comple... 12097 bp Plant RNAi vector pRNAi-LIC QL-ELE-00-002 215 bp View
KP844565.1 nt Ti Plasmid Binary Vector pGZ12.0224... 17952 bp Ti plasmid binary vector pGZ12.0224 QL-ELE-00-002 215 bp View
KP844566.1 nt Ti Plasmid Binary Vector pGZ12.0106... 17385 bp Ti plasmid binary vector pGZ12.0106 QL-ELE-00-002 215 bp View
JN947772.1 nt Mus musculus targeted non-condition... 38802 bp Mus musculus QL-ELE-00-002 215 bp View
KR071149.1 nt Donor vector pTKDP-neo, complete se... 5846 bp Donor vector pTKDP-neo QL-ELE-00-002 215 bp View
HM049176.1 nt Promoter probe vector pEvoGlowRed, ... 7817 bp Promoter probe vector pEvoGlowRed QL-ELE-00-002 215 bp View
HM049177.1 nt Mariner mini-transposon delivery ve... 8170 bp Mariner mini-transposon delivery vector pMaGlowRedKm QL-ELE-00-002 215 bp View
HM049178.1 nt Mariner mini-transposon delivery ve... 7071 bp Mariner mini-transposon delivery vector pMaTcGlow QL-ELE-00-002 215 bp View
HM049180.1 nt Mariner mini-transposon delivery ve... 5615 bp Mariner mini-transposon delivery vector pMaGlow QL-ELE-00-002 215 bp View
HM049182.1 nt Mariner mini-transposon delivery ve... 7375 bp Mariner mini-transposon delivery vector pMaEvo QL-ELE-00-002 215 bp View
HM049183.1 nt Reporter vector pGlowRed, complete ... 7960 bp Reporter vector pGlowRed QL-ELE-00-002 215 bp View
KR233517.1 nt Protein fusion vector pTcPTPN-CO 1.... 7373 bp Protein fusion vector pTcPTPN-CO 1.1 QL-ELE-00-002 215 bp View
AB570107.1 nt Transformation vector pHA-neo3 DNA,... 5418 bp Transformation vector pHA-neo3 QL-ELE-00-002 215 bp View
AB570111.1 nt Transformation vector pFZZ-neo3 DNA... 5865 bp Transformation vector pFZZ-neo3 QL-ELE-00-002 215 bp View
HM365221.1 nt Mus musculus transgenic glucocortic... 4964 bp Mus musculus QL-ELE-00-002 215 bp View
JN947773.1 nt Mus musculus targeted non-condition... 38219 bp Mus musculus QL-ELE-00-002 215 bp View
JN948644.1 emblreltgn Mus musculus targeted KO-first, con... 38778 bp Mus musculus QL-ELE-00-002 215 bp View
JN947774.1 nt Mus musculus targeted non-condition... 40042 bp Mus musculus QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.