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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU862243.1 nt Burkholderia suicide vector pMo130,... 6127 bp Burkholderia suicide vector pMo130 QL-ELE-00-002 215 bp View
EU862244.1 nt Burkholderia replicative vector pMo... 7108 bp Burkholderia replicative vector pMo168 QL-ELE-00-002 215 bp View
JN947730.1 nt Mus musculus targeted KO-first, con... 37948 bp Mus musculus QL-ELE-00-002 215 bp View
JN947731.1 nt Mus musculus targeted non-condition... 38386 bp Mus musculus QL-ELE-00-002 215 bp View
JN947732.1 nt Mus musculus targeted non-condition... 40490 bp Mus musculus QL-ELE-00-002 215 bp View
JN947733.1 nt Mus musculus targeted non-condition... 37989 bp Mus musculus QL-ELE-00-002 215 bp View
JN947734.1 nt Mus musculus targeted non-condition... 39557 bp Mus musculus QL-ELE-00-002 215 bp View
EU908845.1 nt Expression vector pDM310, complete ... 8467 bp Expression vector pDM310 QL-ELE-00-002 215 bp View
EU908848.1 nt Expression vector pDM309, complete ... 8596 bp Expression vector pDM309 QL-ELE-00-002 215 bp View
JN948591.1 emblreltgn Mus musculus targeted non-condition... 39511 bp Mus musculus QL-ELE-00-002 215 bp View
EU933992.1 nt Agrobacterium binary gap repair vec... 7890 bp Agrobacterium binary gap repair vector pGAP-Km QL-ELE-00-002 215 bp View
EU912539.1 nt Expression vector pDM304, complete ... 6839 bp Expression vector pDM304 QL-ELE-00-002 215 bp View
AB434472.1 nt Synthetic construct aphA, pyrE, gfp... 4263 bp synthetic construct QL-ELE-00-002 215 bp View
AB434474.1 nt Synthetic construct gfpuv5, aphA ge... 3068 bp synthetic construct QL-ELE-00-002 215 bp View
AB434475.1 nt Synthetic construct gfpuv5, aphA ge... 2773 bp synthetic construct QL-ELE-00-002 215 bp View
FJ155667.1 nt Allelic replacement vector pJC84, c... 3775 bp Allelic replacement vector pJC84 QL-ELE-00-002 215 bp View
JN947735.1 nt Mus musculus targeted non-condition... 39285 bp Mus musculus QL-ELE-00-002 215 bp View
EU886197.1 nt Transformation vector pBISN1-IN, co... 13144 bp Transformation vector pBISN1-IN QL-ELE-00-002 215 bp View
JN948592.1 emblreltgn Mus musculus targeted non-condition... 37985 bp Mus musculus QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.