European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU676804.1 nt Gene trapping vector VICTR48 inferr... 5174 bp Gene trapping vector VICTR48 QL-ELE-00-002 215 bp View
FM162567.1 nt Trypanosoma brucei Lister 427 surfa... 51758 bp Trypanosoma brucei brucei QL-ELE-00-002 215 bp View
KP722020.1 nt Escherichia coli strain C25 plasmid... 21444 bp Escherichia coli QL-ELE-00-002 215 bp View
JN948586.1 emblreltgn Mus musculus targeted non-condition... 39098 bp Mus musculus QL-ELE-00-002 215 bp View
JN948587.1 emblreltgn Mus musculus targeted non-condition... 38422 bp Mus musculus QL-ELE-00-002 215 bp View
JN948588.1 emblreltgn Mus musculus targeted non-condition... 38048 bp Mus musculus QL-ELE-00-002 215 bp View
JN948589.1 emblreltgn Mus musculus targeted non-condition... 39191 bp Mus musculus QL-ELE-00-002 215 bp View
AB293445.1 nt Saccharomyces cerevisiae gene for a... 43682 bp Saccharomyces cerevisiae QL-ELE-00-002 215 bp View
AB293446.1 nt Saccharomyces cerevisiae gene for a... 45016 bp Saccharomyces cerevisiae QL-ELE-00-002 215 bp View
JN947724.1 nt Mus musculus targeted non-condition... 37756 bp Mus musculus QL-ELE-00-002 215 bp View
JN947725.1 nt Mus musculus targeted non-condition... 37847 bp Mus musculus QL-ELE-00-002 215 bp View
KP638483.1 nt Cloning vector pPIPRA726, complete ... 10181 bp Cloning vector pPIPRA726 QL-ELE-00-002 215 bp View
JN947726.1 nt Mus musculus targeted non-condition... 37924 bp Mus musculus QL-ELE-00-002 215 bp View
DI095621.1 emblrelpat METHOD FOR THE GENETIC MODIFICATION... 11611 bp unidentified QL-ELE-00-002 215 bp View
JN947727.1 nt Mus musculus targeted non-condition... 40488 bp Mus musculus QL-ELE-00-002 215 bp View
JN964654.1 emblreltgn Mus musculus targeted non-condition... 37846 bp Mus musculus QL-ELE-00-002 215 bp View
JN947728.1 nt Mus musculus targeted non-condition... 38001 bp Mus musculus QL-ELE-00-002 215 bp View
JN947729.1 nt Mus musculus targeted non-condition... 37815 bp Mus musculus QL-ELE-00-002 215 bp View
JN964661.1 emblreltgn Mus musculus targeted non-condition... 38393 bp Mus musculus QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.