European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN947716.1 nt Mus musculus targeted non-condition... 39586 bp Mus musculus QL-ELE-00-002 215 bp View
JN947717.1 nt Mus musculus targeted non-condition... 39684 bp Mus musculus QL-ELE-00-002 215 bp View
JN947718.1 nt Mus musculus targeted non-condition... 39941 bp Mus musculus QL-ELE-00-002 215 bp View
EF437950.1 nt Expression vector pcDNA3-K-AQP4d, c... 6161 bp Expression vector pcDNA3-K-AQP4d QL-ELE-00-002 215 bp View
EF437951.1 nt Expression vector pcDNA3-AQP4d, com... 6349 bp Expression vector pcDNA3-AQP4d QL-ELE-00-002 215 bp View
EF437952.1 nt Expression vector pXoom-AQP4d, comp... 5829 bp Expression vector pXoom-AQP4d QL-ELE-00-002 215 bp View
EF437953.1 nt Expression vector pcDNA3-AQP4e, com... 6675 bp Expression vector pcDNA3-AQP4e QL-ELE-00-002 215 bp View
EF437955.1 nt Expression vector pXoom-AQP4e, comp... 6182 bp Expression vector pXoom-AQP4e QL-ELE-00-002 215 bp View
EF437956.1 nt Expression vector pcDNA3-AQP4f, com... 6510 bp Expression vector pcDNA3-AQP4f QL-ELE-00-002 215 bp View
EU024546.1 nt Cloning vector pCPP5702, complete s... 8791 bp Cloning vector pCPP5702 QL-ELE-00-002 215 bp View
EU024548.1 nt Cloning vector pCPP5250, complete s... 5155 bp Cloning vector pCPP5250 QL-ELE-00-002 215 bp View
JN948569.1 emblreltgn Mus musculus targeted KO-first, con... 38088 bp Mus musculus QL-ELE-00-002 215 bp View
JN948570.1 emblreltgn Mus musculus targeted KO-first, con... 39343 bp Mus musculus QL-ELE-00-002 215 bp View
JN947719.1 nt Mus musculus targeted non-condition... 39713 bp Mus musculus QL-ELE-00-002 215 bp View
JN948571.1 emblreltgn Mus musculus targeted KO-first, con... 38087 bp Mus musculus QL-ELE-00-002 215 bp View
JN947720.1 nt Mus musculus targeted non-condition... 38001 bp Mus musculus QL-ELE-00-002 215 bp View
JN947721.1 nt Mus musculus targeted non-condition... 36503 bp Mus musculus QL-ELE-00-002 215 bp View
EU146228.1 nt Transposon delivery vector pAW068, ... 9406 bp Transposon delivery vector pAW068 QL-ELE-00-002 215 bp View
AB364163.1 nt Gateway binary vector R4pGWB401 DNA... 10835 bp Gateway binary vector R4pGWB401 QL-ELE-00-002 215 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.