Amplicon details |
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Amplicon: |
565 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg 251 ataaagtgaa ggataaacgt atatacgtac tgaatactat atcaaatgat 301 taatgacgac tcgactgaat ctgtattttt tatataaaaa cggaagaatt 351 ggtgtgaata gattccacat tgaagaaaga atcgaatatt cattgatcaa 401 atgattcact ccatagtctg atagatcttt tcaagaattg attaatcgga 451 cgagaataaa gatagagtcc cgttctacat gtcaatgtcg gcaacaatga 501 aatttatagt aagaggaaaa tccgtcgact ttaaaaatcg tgagggttca 551 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KM592185.1 | nt | Tricalysia semidecidua voucher Dess... | 1692 bp | Tricalysia semidecidua | QL-PLN-00-007 | 565 bp | View |
| KJ815461.1 | nt | Tricalysia ambrensis voucher Bremer... | 1713 bp | Tricalysia ambrensis | QL-PLN-00-007 | 565 bp | View |
| KJ815462.1 | nt | Tricalysia analamazaotrensis vouche... | 1705 bp | Tricalysia analamazaotrensis | QL-PLN-00-007 | 565 bp | View |
| KJ815464.1 | nt | Tricalysia boiviniana voucher Razak... | 1723 bp | Tricalysia boiviniana | QL-PLN-00-007 | 565 bp | View |
| KJ815467.1 | nt | Tricalysia cryptocalyx voucher Raza... | 1694 bp | Tricalysia cryptocalyx | QL-PLN-00-007 | 565 bp | View |
| KJ815468.1 | nt | Tricalysia dauphinensis voucher Kai... | 1698 bp | Tricalysia dauphinensis | QL-PLN-00-007 | 565 bp | View |
| KJ815471.1 | nt | Tricalysia leucocarpa voucher Breme... | 1720 bp | Tricalysia leucocarpa | QL-PLN-00-007 | 565 bp | View |
| KJ815474.1 | nt | Tricalysia niamniamensis voucher Gi... | 1647 bp | Tricalysia niamniamensis | QL-PLN-00-007 | 565 bp | View |
| KJ815475.1 | nt | Tricalysia orientalis voucher Razaf... | 1703 bp | Tricalysia orientalis | QL-PLN-00-007 | 565 bp | View |
| KJ815476.1 | nt | Tricalysia pallens voucher Luke 832... | 1697 bp | Tricalysia pallens | QL-PLN-00-007 | 565 bp | View |
| KJ815477.1 | nt | Tricalysia perrieri voucher Razafim... | 1703 bp | Tricalysia perrieri | QL-PLN-00-007 | 565 bp | View |
| KJ815479.1 | nt | Tricalysia verdcourtiana voucher Lu... | 1703 bp | Tricalysia verdcourtiana | QL-PLN-00-007 | 565 bp | View |
| KJ815469.1 | nt | Tricalysia sp. Razakamalala RZK 640... | 1706 bp | Tricalysia sp. Razakamalala RZK 6403 | QL-PLN-00-007 | 565 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.