Amplicon details

Amplicon:

612 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaagggggtt ctcgaactag
151   aatacaaagg aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   gaatcgagtt aattacgttg tgttgttagt gttagtggga ttccttctaa
251   attcgagaaa gaagggcttt atacatctaa taaacacgta tagatactga
301   catagcaaac gattaatcac agaacccata ttataatata ggttctttat
351   tcttttttag aatgaaatag aaatgattat gaaataaaaa attctgaatt
401   tttttagaat tattgtgaat ccattccaat cgaatattta gtaatcaaat
451   ccttcaattc aaagttttga ggtctttaaa aaagtggatt aatcggacga
501   ggacaaagag agagtcccat tctacatgtc aatactgaca acaatgaaat
551   ttctagtaaa aggaaaatcc gtcgacttta taagtcgtga gggttcaagt
601   ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY589141.1 nt Puccinellia glaucescens voucher PI ... 1855 bp Puccinellia glaucescens QL-PLN-00-007 612 bp View
DQ353964.1 nt Phleum pratense tRNA-Thr (trnT) gen... 1857 bp Phleum pratense QL-PLN-00-007 612 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.