Amplicon details

Amplicon:

616 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251   ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag
301   atagcaaacg attaatcaca gagcccatat tataatagaa tattggttct
351   ttattctttt ttagaatgaa atagaaatga ttatgaaata aaaaattcat
401   aattttttta gaattattgt gaatccattc caatcgaata tttagtaatc
451   aaatccttca gttcaaagtt ttgaggtctt taaaaaagtg gattaatcgg
501   acgaggacaa agagagagtc ccattctaca tgtcaatact gacaacaatg
551   aaatttctag taaaaggaaa atccgtcgac tttataagtc gtgagggttc
601   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY589136.1 nt Poa nervosa voucher PI 232352 trnT-... 1874 bp Poa nervosa QL-PLN-00-007 616 bp View
KX522666.1 nt Poa nervosa voucher PI 232352 trnT-... 1858 bp Poa nervosa QL-PLN-00-007 616 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.