JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

611 bp

1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251   ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag
301   atagcaaacg attaatcaca gaacccatat tataatattg gttctttatt
351   cttttttaga atgaaataga aatgattatg aaataaaaaa ttcataattt
401   ttttagaatt attgtgaatc cattccaatc gaatatttag taatcaaatc
451   cttcaattca aagttttgag gtcgttaaaa aagtggatta atcggatgag
501   gacaaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt
551   tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag ggttcaagtc
601   cctctatccc c

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
KY987101.1	nt	Poa laxa subsp. flexuosa voucher O:...	1795 bp	Poa laxa subsp. flexuosa	QL-PLN-00-007	611 bp	View
KY987108.1	nt	Poa laxa subsp. consauliae voucher ...	1793 bp	Poa flexuosa subsp. consauliae	QL-PLN-00-007	611 bp	View
KY987110.1	nt	Poa nemoralis voucher CAN:Gillespie...	1794 bp	Poa nemoralis	QL-PLN-00-007	611 bp	View
AY589135.1	nt	Poa nemoralis voucher PI 3717759 tr...	1870 bp	Poa nemoralis	QL-PLN-00-007	611 bp	View
DQ353998.1	nt	Poa leptocoma voucher Soreng & Sore...	1770 bp	Poa leptocoma	QL-PLN-00-007	611 bp	View
KY987088.1	nt	Poa attenuata voucher CAN:Olonova 2...	1794 bp	Poa attenuata	QL-PLN-00-007	611 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.