Amplicon details |
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Amplicon: |
611 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga 151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa 251 ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag 301 atagcaaacg attaatcaca gaacccatat tataatattg gttctttatt 351 cttttttaga atgaaataga aatgattatg aaataaaaaa ttcataattt 401 ttttagaatt attgtgaatc cattccaatc gaatatttag taatcaaatc 451 cttcaattca aagttttgag gtcgttaaaa aagtggatta atcggatgag 501 gacaaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt 551 tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag ggttcaagtc 601 cctctatccc c |
Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
---|---|---|---|---|---|---|---|
AY589128.1 | nt | Poa compressa voucher PI 243216 trn... | 1870 bp | Poa compressa | QL-PLN-00-007 | 611 bp | View |
AY589132.1 | nt | Poa interior voucher PI 236909 trnT... | 1870 bp | Poa interior | QL-PLN-00-007 | 611 bp | View |
DQ353993.1 | nt | Poa hartzii subsp. hartzii voucher ... | 1818 bp | Poa hartzii subsp. hartzii | QL-PLN-00-007 | 611 bp | View |
DQ353996.1 | nt | Poa abbreviata voucher Gillespie & ... | 1825 bp | Poa abbreviata | QL-PLN-00-007 | 611 bp | View |
DQ353997.1 | nt | Poa pseudoabbreviata voucher Soreng... | 1828 bp | Poa pseudoabbreviata | QL-PLN-00-007 | 611 bp | View |
DQ353999.1 | nt | Poa leptocoma voucher Soreng & Sore... | 1784 bp | Poa leptocoma | QL-PLN-00-007 | 611 bp | View |
DQ354002.1 | nt | Poa interior voucher Soreng & Soren... | 1805 bp | Poa interior | QL-PLN-00-007 | 611 bp | View |
DQ354003.1 | nt | Poa compressa voucher Gillespie 645... | 1853 bp | Poa compressa | QL-PLN-00-007 | 611 bp | View |
GQ324418.1 | nt | Poa laxa subsp. flexuosa voucher CA... | 1802 bp | Poa laxa subsp. flexuosa | QL-PLN-00-007 | 611 bp | View |
GQ324431.1 | nt | Poa lettermanii voucher US:Soreng &... | 1801 bp | Poa lettermanii | QL-PLN-00-007 | 611 bp | View |
MT273359.1 | nt | Poa compressa voucher CAN:Gillespie... | 1794 bp | Poa compressa | QL-PLN-00-007 | 611 bp | View |
MT273374.1 | nt | Poa skvortzovii voucher US:Soreng &... | 1794 bp | Poa skvortzovii | QL-PLN-00-007 | 611 bp | View |
KJ681100.1 | nt | Poa langtangensis voucher R 88 tRNA... | 1021 bp | Poa langtangensis | QL-PLN-00-007 | 611 bp | View |
KX522665.1 | nt | Poa nemoralis voucher PI 371759 trn... | 1855 bp | Poa nemoralis | QL-PLN-00-007 | 611 bp | View |
KX522667.1 | nt | Poa palustris voucher PI 232351 trn... | 1854 bp | Poa palustris | QL-PLN-00-007 | 611 bp | View |
KY987089.1 | nt | Poa biebersteinii voucher CAN:Gille... | 1794 bp | Poa biebersteinii | QL-PLN-00-007 | 611 bp | View |
KY987090.1 | nt | Poa dahurica voucher CAN:Olonova 20... | 1794 bp | Poa dahurica | QL-PLN-00-007 | 611 bp | View |
KY987093.1 | nt | Poa glauca voucher US:Soreng 7965 t... | 1794 bp | Poa glauca | QL-PLN-00-007 | 611 bp | View |
KY987094.1 | nt | Poa glauca subsp. glauca voucher US... | 1794 bp | Poa glauca subsp. glauca | QL-PLN-00-007 | 611 bp | View |
KY987098.1 | nt | Poa laxa subsp. fernaldiana voucher... | 1795 bp | Poa laxa subsp. fernaldiana | QL-PLN-00-007 | 611 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.