Amplicon details |
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Amplicon: |
611 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga 151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa 251 ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag 301 atagcaaacg attaatcaca gaacccatat tataatattg gttctttatt 351 cttttttaga atgaaataga aatgattatg aaataaaaaa ttcataattt 401 ttttagaatt attgtgaatc cattccaatc gaatatttag taatcaaatc 451 cttcaattca aagttttgag gtctttaaaa aagtggatta atcggacgag 501 gacaaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt 551 tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag ggttcaagtc 601 cctctatccc c |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AY589126.1 | nt | Poa arida voucher PI 578806 trnT-tr... | 1854 bp | Poa arida | QL-PLN-00-007 | 611 bp | View |
| AY589143.1 | nt | Poa secunda voucher PI 504370 trnT-... | 1854 bp | Poa secunda | QL-PLN-00-007 | 611 bp | View |
| DQ353990.1 | nt | Poa hartzii subsp. hartzii voucher ... | 1790 bp | Poa hartzii subsp. hartzii | QL-PLN-00-007 | 611 bp | View |
| DQ353992.1 | nt | Poa ammophila voucher Gillespie 585... | 1842 bp | Poa ammophila | QL-PLN-00-007 | 611 bp | View |
| DQ354057.1 | nt | Poa stenantha trnT-trnL intergenic ... | 1815 bp | Poa stenantha | QL-PLN-00-007 | 611 bp | View |
| KM524089.1 | nt | Poa ursina voucher CAN:Hajkova et a... | 1778 bp | Poa ursina | QL-PLN-00-007 | 611 bp | View |
| GQ984181.1 | nt | Poa secunda tRNA-Leu gene, partial ... | 611 bp | Poa secunda | QL-PLN-00-007 | 611 bp | View |
| GQ324436.1 | nt | Poa media voucher US:Hajkova et al.... | 1785 bp | Poa media | QL-PLN-00-007 | 611 bp | View |
| MH898854.1 | nt | Poa cenisia subsp. contracta vouche... | 1778 bp | Poa cenisia subsp. contracta | QL-PLN-00-007 | 611 bp | View |
| MH898856.1 | nt | Poa macroclada voucher US:Soreng 74... | 1778 bp | Poa macroclada | QL-PLN-00-007 | 611 bp | View |
| MH898858.1 | nt | Poa unilateralis subsp. pachypholis... | 1783 bp | Poa unilateralis subsp. pachypholis | QL-PLN-00-007 | 611 bp | View |
| MH898859.1 | nt | Poa unilateralis subsp. unilaterali... | 1778 bp | Poa unilateralis subsp. unilateralis | QL-PLN-00-007 | 611 bp | View |
| DQ353991.1 | nt | Poa secunda subsp. secunda voucher ... | 1884 bp | Poa secunda subsp. secunda | QL-PLN-00-007 | 611 bp | View |
| KY987095.1 | nt | Poa hartzii subsp. hartzii voucher ... | 1784 bp | Poa hartzii subsp. hartzii | QL-PLN-00-007 | 611 bp | View |
| KY987111.1 | nt | Poa ursina voucher CAN:Gillespie et... | 1776 bp | Poa ursina | QL-PLN-00-007 | 611 bp | View |
| MH898851.1 | nt | Poa ammophila voucher CAN:Gillespie... | 1778 bp | Poa ammophila | QL-PLN-00-007 | 611 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.