Amplicon details |
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Amplicon: |
563 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaaag gggttctcga 151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tcctttaata 251 aacacgtatc gatacttaca tagcaaacga ttaatcacag aacccatatt 301 ataatattgg ttctttattc ttttttagaa tgaaataaaa aattcagaat 351 ttttttcgaa ttattgtgaa tccattccaa tcgaatattt agtaatcaaa 401 tccttcaatt caaagttttg aggtctttaa aaaagtggat taatcggacg 451 aggacaaaga gagagtccca ttctacatgt caatactgac aacaatgaaa 501 tttctagtaa aaggaaaatc cgtcgacttt ataagtcgtg agggttcaag 551 tccctctatc ccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AY589122.1 | nt | Poa alpina voucher PI 372559 trnT-t... | 1835 bp | Poa alpina | QL-PLN-00-007 | 563 bp | View |
| DQ353986.1 | nt | Poa alpina voucher Gillespie et al.... | 1764 bp | Poa alpina | QL-PLN-00-007 | 563 bp | View |
| GQ324402.1 | nt | Poa badensis voucher US:Hajkova 200... | 1766 bp | Poa badensis | QL-PLN-00-007 | 563 bp | View |
| GQ324404.1 | nt | Poa bulbosa voucher US:Soreng 5814 ... | 1747 bp | Poa bulbosa | QL-PLN-00-007 | 563 bp | View |
| GQ324460.1 | nt | Poa thessala voucher US:Soreng et a... | 1767 bp | Poa thessala | QL-PLN-00-007 | 563 bp | View |
| KM524088.1 | nt | Poa thessala voucher CAN:Gillespie ... | 1760 bp | Poa thessala | QL-PLN-00-007 | 563 bp | View |
| KX522668.1 | nt | Poa pumila voucher PI 662326 trnT-L... | 1821 bp | Poa pumila | QL-PLN-00-007 | 563 bp | View |
| KX118766.1 | nt | Poa sinaica var. sinaica voucher US... | 1758 bp | Poa sinaica var. sinaica | QL-PLN-00-007 | 563 bp | View |
| KX118767.1 | nt | Poa sinaica var. vivipara voucher C... | 1758 bp | Poa sinaica var. vivipara | QL-PLN-00-007 | 563 bp | View |
| KX118751.1 | nt | Poa bactriana subsp. glabriflora vo... | 1759 bp | Poa bactriana subsp. glabriflora | QL-PLN-00-007 | 563 bp | View |
| AY589127.1 | nt | Poa bulbosa voucher PI 314304 trnT-... | 1844 bp | Poa bulbosa | QL-PLN-00-007 | 563 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.