Amplicon details

Amplicon:

563 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttg actgcgttgg tagaggaatc tttccatcga aacttcagaa
251   aggatgaagg ataaaggtat atattgaata ctatataaaa tgattaatga
301   tggccctaat ctgtatctgt atttttttat atgaaaaatg gaagaattgg
351   tatgaagtga ttccacattg aagaaagaat caaatattcc ttcatcaaat
401   cattcactcc acagtctgat agttctttta aagaactgat taatcggaca
451   agaataaaga tagagtccca ttctacatgt caatattggc aacaatgcaa
501   tttatagtaa gaggaaaatc cgtcgacttt taaagtcgtg agggttcaag
551   tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT650367.1 nt Eremophila gilesii voucher MELU pen... 151446 bp Eremophila gilesii QL-PLN-00-007 563 bp View
MT650348.1 nt Eremophila shonae voucher MELUD1193... 151629 bp Eremophila shonae QL-PLN-00-007 563 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.