Amplicon details

Amplicon:

565 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtagggaa
51    acctactaag tggtaacttc caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctgtgttcag aaaacaaggg ttcagaaagc
151   gagaatcaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttg actgcattgg tagaggaatc gaatccttct atcgaaacta
251   cagaaaagat gaccctgtat acatacgtat acatactgaa atatcaaata
301   attaatcacg actcgaatcc ttattttttt atatgaaaaa tttaagaatt
351   attgtgaatc gattccaagt tgaaggaaga atcgaatatt cagtgatcaa
401   atcattcact cccgagtctg atagatcttt tgaagaactg attaatcgga
451   cgagaataaa gatagagtcc cattctacat gtcaatacag acaacaatga
501   aatttatagt aagaggaaaa tccgtcgact ttagaaatcg tgagggttca
551   agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY305823.1 nt Magnolia sprengeri trnL, trnL-trnF ... 982 bp Magnolia sprengeri QL-PLN-00-007 565 bp View
AY305824.1 nt Magnolia liliiflora trnL, trnL-trnF... 982 bp Magnolia liliiflora QL-PLN-00-007 565 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.