Amplicon details

Amplicon:

564 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggagtt gactgcgttg gtagaggaat ctttccatcg aaacttcaga
251   aaggatgaag gataaaggta tatattgaat actatatcaa atgattaatg
301   atggccccaa tctgtatctg tattttttta tatgaaaaat ggaagaattg
351   gtatgaagtg attccacatt gaagaaagaa ttaaatattc cttcatcaaa
401   tcattcactc cacagtctga tagttctttt aaagaactga ttaatcggac
451   aagaataaag atagagtccc attctacatg tcaatattgg caacaatgca
501   atttatagta agaggaaaat ccgtcgactt ttaaagtcgt gagggttcaa
551   gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT650290.1 nt Eremophila scoparia voucher MELUD11... 151628 bp Eremophila scoparia QL-PLN-00-007 564 bp View
MT650396.1 nt Eremophila scoparia voucher MELUD11... 151747 bp Eremophila scoparia QL-PLN-00-007 564 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.