Amplicon details

Amplicon:

566 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaaaggat aggtgcagag actcaatgga agctgttcta
201   acaaatggag ttgactgcgt tggtagagga atctttccat cgaaacttca
251   gaaaggatga aggataaagg tatatattga atactatatc aaatgattaa
301   tgatggccct aatctgtatc tgtatttttt tatatgaaaa atggaagaat
351   tggtatgaag tgattccaca ttgaagaaag aatcaaatat tccttcatca
401   aatcattcac tccacagtct gatagttctt ttaaagaact gattaatcgg
451   acaagaataa agatagagtc ccattctaca tgtcaatatt ggcaacaatg
501   caatttatag taagaggaaa atccgtcgac ttttaaagtc gtgagggttc
551   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT650414.1 nt Eremophila purpurascens voucher MEL... 151586 bp Eremophila purpurascens QL-PLN-00-007 566 bp View
MT650226.1 nt Eremophila glabra voucher MELUD1191... 151552 bp Eremophila glabra QL-PLN-00-007 566 bp View
MT650229.1 nt Eremophila glabra voucher MELUD1191... 151562 bp Eremophila glabra QL-PLN-00-007 566 bp View
MT650293.1 nt Eremophila subfloccosa voucher MELU... 151544 bp Eremophila subfloccosa QL-PLN-00-007 566 bp View
MT650342.1 nt Eremophila glabra voucher MELUD1192... 151587 bp Eremophila glabra QL-PLN-00-007 566 bp View
MT650344.1 nt Eremophila glabra voucher MELUD1193... 151578 bp Eremophila glabra QL-PLN-00-007 566 bp View
MT650350.1 nt Eremophila hillii voucher MELU pend... 151564 bp Eremophila hillii QL-PLN-00-007 566 bp View
MT650369.1 nt Eremophila decipiens voucher MELU p... 151562 bp Eremophila decipiens QL-PLN-00-007 566 bp View
MT650383.1 nt Eremophila glabra voucher MELU pend... 151582 bp Eremophila glabra QL-PLN-00-007 566 bp View
MT650392.1 nt Eremophila glabra voucher MELUD1191... 151569 bp Eremophila glabra QL-PLN-00-007 566 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.