JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

565 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201   caaatggagt tgactgcgtt ggtagaggaa tctttccatc gaaacttcag
251   aaaggatgaa ggataaaggt atatattgaa tactatatca aatgattaat
301   gatggcccta atctgtatct gtattttttt atatgaaaaa tggaagaatt
351   ggtatgaagt gattccacat tgaagaaaga atcaaatatt ccttcatcaa
401   atcattcact ccacagtctg atagttcttt taaagaactg attaatcgga
451   caagaataaa gatagagtcc cattctacat gtcaatattg gcaacaatgc
501   aatttatagt aagaggaaaa tccgtcgact ttaaaagtcg tgagggttca
551   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
MT650220.1	nt	Eremophila clarkei voucher MELUD119...	151662 bp	Eremophila clarkei	QL-PLN-00-007	565 bp	View
MT650264.1	nt	Eremophila glabra voucher MELUD1191...	151508 bp	Eremophila glabra	QL-PLN-00-007	565 bp	View
MT650313.1	nt	Eremophila platycalyx voucher MELUD...	151571 bp	Eremophila platycalyx	QL-PLN-00-007	565 bp	View
MT650318.1	nt	Eremophila lanceolata voucher MELUD...	151587 bp	Eremophila lanceolata	QL-PLN-00-007	565 bp	View
MT650356.1	nt	Eremophila sp. Murgoo (S.J.J.Davies...	151655 bp	Eremophila sp. Murgoo (S.J.J.Davies s.n. 15/8/1960)	QL-PLN-00-007	565 bp	View
MT650412.1	nt	Eremophila biserrata voucher MELUD1...	151545 bp	Eremophila biserrata	QL-PLN-00-007	565 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.