Amplicon details |
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Amplicon: |
567 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 actcactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa 151 agtgaaaagg ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcattagtag agaaatcttt tcatctaaaa ttccgaaagg 251 gtaaagtgaa agataaacgt atatatacgt attgaatact atgtcaaatg 301 attaatgacg actcgactga atctgtattt tttatatgaa aacggaagaa 351 ttggtgtgaa tagattccac attgaagaaa gaatcgaata ttcattgatc 401 aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg 451 gacgagaata aagatagagt cctgttctac atgtcaatgt cggcaacaat 501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt 551 caagtccctc tatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KF965269.1 | nt | Tarenna buruensis isolate V096 trnT... | 1651 bp | Tarenna sambucina var. buruensis | QL-PLN-00-007 | 567 bp | View |
| KM592176.1 | nt | Tarenna sambucina voucher Mouly & a... | 1670 bp | Tarenna sambucina | QL-PLN-00-007 | 567 bp | View |
| KJ815644.1 | nt | Tarenna sambucina voucher Mouly 364... | 1665 bp | Tarenna sambucina | QL-PLN-00-007 | 567 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.