Amplicon details

Amplicon:

566 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa
151   agtgaaaaag gataggtgca gagactcaac ggaagctgtt ctaacaaatg
201   gagttggctg cgttagtaga gaaatctttc catctaaaat tccgaaagga
251   taaagtgaag gataaacgta tatatacgta ttgaatacta tatcaaatga
301   ttaatgacga ctcgactgaa tccatatttt ttatatgaaa acggaagaat
351   tggtgtgaat agattccaca ttgaagaagg aatcgaatat tcattgatca
401   aatgattcac tccatagtct gatagatctt ttcaagaatt tattaatcgg
451   acgagaataa agatagagtc ccgttctaca tgtcaatgtc ggcaacaatg
501   aaatttatag taagaggaaa atccgtcgac tttaaaaatc gtgagggttc
551   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KF965247.1 nt Preussiodora sulphurea isolate BR06... 1695 bp Preussiodora sulphurea QL-PLN-00-007 566 bp View
KF965246.1 nt Preussiodora sulphurea isolate BR01... 1679 bp Preussiodora sulphurea QL-PLN-00-007 566 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.