Amplicon details |
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Amplicon: |
567 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg 251 ataaagtgaa ggataaacgt atatatatgt attgaatact atatcaaatg 301 attaatgacg actcaactga atctgtattt tttatatgaa aacggaagaa 351 ttggtgtgaa tagattccac attgaagaaa gaatcgaata ttcattgatc 401 aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg 451 gacgagaata aagatagagt cccgttctac atgtcaatgt cggcaacaat 501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt 551 caagtccctc tatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KF965200.1 | nt | Flagenium sp. Davis 1210 isolate AM... | 1579 bp | Flagenium sp. Davis 1210 | QL-PLN-00-007 | 567 bp | View |
| KJ815563.1 | nt | Flagenium sp. Razafimandimbison & K... | 1719 bp | Flagenium sp. Razafimandimbison & Kroger 947 | QL-PLN-00-007 | 567 bp | View |
| KJ815565.1 | nt | Flagenium petrikense voucher Kainul... | 1663 bp | Flagenium petrikense | QL-PLN-00-007 | 567 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.