Amplicon details

Amplicon:

566 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    actcactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa
151   agtgaaaagg ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg
251   ataaagtgaa ggataaacgt atatatacgt attaatacta tatcaaatga
301   ttaatgacga ctcgactgaa tctgtatttt ttatatgaaa acggaagaat
351   tggtgtgaac agattccaca ttgaagaaag aatcgaatat tcattgatca
401   aatgattcgc tccatagtct gatagatctt ttcaagaatt gattaatcgg
451   acgagaataa agatagagtc ccgttctaca tgtcaatgtc ggcaacaatg
501   aaatttatag taagaggaaa atccgtcgac tttaaaaatc gtgagggttc
551   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KF965195.1 nt Duroia eriopila isolate BQ091 trnT-... 1624 bp Duroia eriopila QL-PLN-00-007 566 bp View
KF965196.1 nt Duroia eriopila isolate BR061 trnT-... 1722 bp Duroia eriopila QL-PLN-00-007 566 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.