Amplicon details

Amplicon:

537 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgaagacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atccttgttt tctcaaaaca agggttcaga
151   gagcgaaaaa gaggataggt gcagagactc aatggaagct gttctaacaa
201   atggagttga ctgcgttggt agaggaattg aaacttcaga aaggatgaaa
251   cgtatctatt gaatacatta ataatggccc gaatctgtat ctgggttttt
301   gtatatgaaa aatggaagaa ttggtgtgaa ttgatttcac attgataaaa
351   gaatcgaata ttcattgatc aaataattca ccccatagtc cgatagatct
401   cttaaagaat tgattattca gacgagaata aagatagagt cccgttctac
451   atgtcaatac cggcaacaat gaaacttata gtaagaggaa aatccgtcga
501   ctttaaaaat cgtgagggtt caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ492305.1 nt Streptocarpus rexii chloroplast tRN... 870 bp Streptocarpus rexii QL-PLN-00-007 537 bp View
KR704003.1 nt Streptocarpus parviflorus voucher L... 912 bp Streptocarpus parviflorus QL-PLN-00-007 537 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.