Amplicon details

Amplicon:

79 bp
1     cgtcttcaaa gcaagtggat tgatgtgaca tctccactga cgtaagggat
51    gacgcacaat cccactatcc ttcgcaaga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QT-ELE-00-001 79 bp View
HF951365.1 nt Boechera divaricarpa GSS, clone B62... 1162 bp Boechera divaricarpa QT-ELE-00-001 79 bp View
HF951397.1 nt Boechera divaricarpa GSS, clone B62... 1153 bp Boechera divaricarpa QT-ELE-00-001 79 bp View
LT724955.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00990 QT-ELE-00-001 79 bp View
OP947586.1 nt Cauliflower mosaic virus isolate DS... 8028 bp Cauliflower mosaic virus QT-ELE-00-001 79 bp View
ON092626.1 nt Moss mCitrine knock-in vector, comp... 6023 bp Moss mCitrine knock-in vector QT-ELE-00-001 79 bp View
ON092627.1 nt Moss mClover3 knock-in vector, comp... 6023 bp Moss mClover3 knock-in vector QT-ELE-00-001 79 bp View
LT724956.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01000 QT-ELE-00-001 79 bp View
LT724957.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01010 QT-ELE-00-001 79 bp View
KP244679.1 nt Binary vector pJZ253, complete sequ... 11951 bp Binary vector pJZ253 QT-ELE-00-001 79 bp View
KP244680.1 nt Binary vector pJZ254, complete sequ... 11801 bp Binary vector pJZ254 QT-ELE-00-001 79 bp View
KP244681.1 nt Binary vector pJZ202, complete sequ... 12438 bp Binary vector pJZ202 QT-ELE-00-001 79 bp View
JB318786.1 emblrelpat Sequence 129 from Patent EP2441843. 8503 bp synthetic construct QT-ELE-00-001 79 bp View
JB343033.1 emblrelpat Sequence 28 from Patent EP2494051. 18784 bp synthetic construct QT-ELE-00-001 79 bp View
LT724958.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA2a01040 QT-ELE-00-001 79 bp View
JB343035.1 emblrelpat Sequence 30 from Patent EP2494051. 18784 bp synthetic construct QT-ELE-00-001 79 bp View
JB343035.1 emblrelpat Sequence 30 from Patent EP2494051. 18784 bp synthetic construct QT-ELE-00-001 79 bp View
LT724959.1 nt Gateway expression vector pAGRIKOLA... 9913 bp Gateway expression vector pAGRIKOLA-CATMA2a01050 QT-ELE-00-001 79 bp View
JB343036.1 emblrelpat Sequence 31 from Patent EP2494051. 18802 bp synthetic construct QT-ELE-00-001 79 bp View
NRN_CS249133 nrnl1 Sequence 5 from Patent WO2005121347... 5303 bp unidentified QT-ELE-00-001 79 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.