Amplicon details

Amplicon:

613 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaagaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   ttcgagaaag aagggcttta tacatctaat aaacacgtat agatactgac
301   atagcaaacg attaatcaca gaacccatat tataatatat ggttctttat
351   tcttttttag aatgaaatag aaatgattat gaaataaaaa attcagaatt
401   ttttttagaa ttattgtgaa tacattccaa tcgaatattt agtaatcaaa
451   tccttcaatt caaagttttg aggtctttaa aaaagtggat taatcggacg
501   aggacaaaga gagagtccca ttctacatgt caatactgac aacaatgaaa
551   tttctagtaa aaggaaaatc cgtcgacttt ataagtcgtg agggttcaag
601   tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KM524066.1 nt Dupontiopsis hayachinensis voucher ... 1772 bp Dupontiopsis hayachinensis QL-PLN-00-007 613 bp View
KM524067.1 nt Dupontiopsis hayachinensis voucher ... 1773 bp Dupontiopsis hayachinensis QL-PLN-00-007 613 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.