Amplicon details

Amplicon:

195 bp
1     gcgcctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51    gcctctgccg acagtggtcc taaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc ccaacacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP947585.1 nt Cauliflower mosaic virus isolate DS... 8015 bp Cauliflower mosaic virus QL-ELE-00-001 195 bp View
KY703615.1 nt Cauliflower mosaic virus strain DSM... 8010 bp Cauliflower mosaic virus QL-ELE-00-001 195 bp View
OP947585.1 nt Cauliflower mosaic virus isolate DS... 8015 bp Cauliflower mosaic virus QL-ELE-00-005 195 bp View
KY703615.1 nt Cauliflower mosaic virus strain DSM... 8010 bp Cauliflower mosaic virus QL-ELE-00-005 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.