Amplicon details

Amplicon:

562 bp
1     cgaaatcggt agacgctacg gacttaatta taattaaatt gagccttagt
51    gtgggaaacc tactaagtga taactttcaa attcagagaa accccggaat
101   taataaaaat gggcgatcct gatccaaatc ctgttttttc aaaacaaagg
151   ttcaaaaaac aaactaaagg ataggtgcag agactcaatg gaagctgttc
201   taacaaatgg agttgattgc gttggtagag gaatcctttc tacggaaact
251   tcagaaagga tgaaggataa acgtatctat cgaatactat atcaaatgat
301   taatgatggc ccgaatccgt atttttaata tgaaaaatag aagaattggt
351   gtgaattgat tctatattga agaaaaaatc gaatattcat tcatcaaatc
401   attcactcca tagtccgata gatcttttaa agaactgatt aatcggacga
451   gaataaagat agagtcccat cctacatgtc aatactggca acaatgaaat
501   ttatagtaag aggaaaatcc gtcgacttta aaaatcgtga gggttcaagt
551   ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON815629.1 nt Phlomoides speciosa isolate M82 vou... 151288 bp Phlomoides speciosa QL-PLN-00-007 562 bp View
OQ672932.1 nt Phlomoides speciosa plastid, comple... 151288 bp Phlomoides speciosa QL-PLN-00-007 562 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.