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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 557 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggagtt gactgcgttg gtagaggaat ctttccatcg aaacttcaga
251   aaggataaag gtatatattg aatactatat caaatgatta atgatggccc
301   taatctgtat ctgtattttt ttatatgaaa aatggaagaa ttggtatgaa
351   gtgattccac attgaagaaa gaatcaaata ttccttcatc aaatcattca
401   ctccacagtc tgatagttct tttaaagaac tgattaatcg gacaagaata
451   aagatagagt cccattctac atgtcaatat tggcaacaat gcaatttata
501   gtaagaggaa aatccgtcga cttttaaagt cgtgagggtt caagtccctc
551   tatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR743518.1 nt Eremophila canaliculata isolate BMR... 151658 bp Eremophila canaliculata QL-PLN-00-007 557 bp View
OR743519.1 nt Eremophila canaliculata isolate BMR... 151662 bp Eremophila canaliculata QL-PLN-00-007 557 bp View
OR743521.1 nt Eremophila canaliculata isolate BMR... 151645 bp Eremophila canaliculata QL-PLN-00-007 557 bp View
OR743525.1 nt Eremophila canaliculata isolate BMR... 151637 bp Eremophila canaliculata QL-PLN-00-007 557 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.