Amplicon details

Amplicon:

557 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggagtt gactgcgttg gtagaggaat ctttccatcg aaacttcaga
251   aaggataaag gtatatattg aatactatct caaatgatta atgatggccc
301   taatctgtat ctgtattttt ttatatgaaa aatggaagaa ttggtatgaa
351   gtgattccac attgaagaaa gaatcaaata ttccttcatc aaatcattca
401   ctccacagtc tgatagttct tttaaagaac tgattaatcg gacaagaata
451   aagatagagt cccattctac atgtcaatat tggcaacaat gcaatttata
501   gtaagaggaa aatccgtcga ctttaaaagt cgtgagggtt caagtccctc
551   tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP169578.1 nt Eremophila capricornica isolate BMR... 151575 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169587.1 nt Eremophila sp. BMR01818 chloroplast... 151593 bp Eremophila sp. BMR01818 QL-PLN-00-007 557 bp View
MT650333.1 nt Eremophila conferta voucher MELUD11... 151530 bp Eremophila conferta QL-PLN-00-007 557 bp View
OL977700.1 nt Eremophila latrobei subsp. filiform... 151550 bp Eremophila latrobei subsp. filiformis QL-PLN-00-007 557 bp View
OP169574.1 nt Eremophila capricornica isolate BMR... 151607 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169575.1 nt Eremophila capricornica isolate BMR... 151575 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169576.1 nt Eremophila latrobei subsp. glabra i... 151574 bp Eremophila latrobei subsp. glabra QL-PLN-00-007 557 bp View
OP169577.1 nt Eremophila capricornica isolate BMR... 151578 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169579.1 nt Eremophila capricornica isolate BMR... 151557 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169580.1 nt Eremophila capricornica isolate BMR... 151583 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169581.1 nt Eremophila capricornica isolate BMR... 151552 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169582.1 nt Eremophila capricornica isolate BMR... 151610 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169583.1 nt Eremophila capricornica isolate BMR... 151581 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169584.1 nt Eremophila capricornica isolate BMR... 151571 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169585.1 nt Eremophila forrestii subsp. forrest... 151588 bp Eremophila forrestii subsp. forrestii QL-PLN-00-007 557 bp View
OP169586.1 nt Eremophila capricornica isolate BMR... 151553 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169588.1 nt Eremophila capricornica isolate BMR... 151577 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169589.1 nt Eremophila capricornica isolate BMR... 151588 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169590.1 nt Eremophila capricornica isolate BMR... 151567 bp Eremophila capricornica QL-PLN-00-007 557 bp View
OP169591.1 nt Eremophila capricornica isolate BMR... 151573 bp Eremophila capricornica QL-PLN-00-007 557 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.