JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

567 bp

1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa
151   agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggagttggct acgttagtag agaaatcttt ccatctaaaa ttccgaaagg
251   ataaagtgaa ggataaacgt atatatacgt attgaatact atatcaaatg
301   attaatgacg actcgactga atctgtattt tttatatgaa aacggaagaa
351   ttggtgtgaa tagattccac attgaagaag gaatcgaata ttcattgatc
401   aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg
451   gacgagaata aagatagagt cccgttctac atgtcaatgt cggcaacaat
501   gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt
551   caagtccctc tatcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
MZ466563.1	nt	Tocoyena longiflora voucher Aona 22...	1711 bp	Tocoyena longiflora	QL-PLN-00-007	567 bp	View
MZ466557.1	nt	Tocoyena orinocensis voucher Groger...	1711 bp	Tocoyena orinocensis	QL-PLN-00-007	567 bp	View
MZ466558.1	nt	Tocoyena williamsii voucher Stahl 3...	1737 bp	Tocoyena williamsii	QL-PLN-00-007	567 bp	View
MZ466559.1	nt	Tocoyena brevifolia voucher Groger ...	1715 bp	Tocoyena brevifolia	QL-PLN-00-007	567 bp	View
MZ466562.1	nt	Tocoyena brasiliensis voucher Alves...	1735 bp	Tocoyena brasiliensis	QL-PLN-00-007	567 bp	View
KF965263.1	nt	Sphinctanthus microphyllus isolate ...	1649 bp	Sphinctanthus microphyllus	QL-PLN-00-007	567 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.