JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

521 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcacgtttt ccgaaaacaa acaaaggttc
151   agaaagcgaa aatcaaaagg ataggtgcag agactcgatg gaagctgttc
201   taacaaatgg agttgattgt cttacattgg tagagaaatc cttctatgga
251   aacttcagaa aagatgaagg ataaacctgt atacataata gagatacaga
301   agaattgata tgaatcgatt ccatattgaa gaaagaatcg aatattcatt
351   gatcaaacca ttcactccat aatctgatag atcttttgaa gaactgatta
401   atcggacgag aataaagata gagtcccgtt ctacatgtca ataccggcaa
451   caatgaaatt tatagtaaga ggaaaatccg tcgatttcaa aaatcatgag
501   ggttcaagtc cctctatccc c

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
ON641306.1	nt	Helichrysum italicum subsp. picardi...	152415 bp	Helichrysum italicum subsp. picardii	QL-PLN-00-007	521 bp	View
ON641295.1	nt	Helichrysum italicum subsp. picardi...	152407 bp	Helichrysum italicum subsp. picardii	QL-PLN-00-007	521 bp	View
ON641360.1	nt	Helichrysum italicum subsp. picardi...	152479 bp	Helichrysum italicum subsp. picardii	QL-PLN-00-007	521 bp	View
KT874489.1	nt	Helichrysum orientale tRNA-Leu (trn...	930 bp	Helichrysum orientale	QL-PLN-00-007	521 bp	View
KT874490.1	nt	Helichrysum amorginum tRNA-Leu (trn...	930 bp	Helichrysum amorginum	QL-PLN-00-007	521 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.