Amplicon details |
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Amplicon: |
611 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaaccagg gggttctcga 151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa 251 ttcgagaagg aagggcttta tacatctaat aaacacctat agatactgcc 301 atagcaaacg attaatcaca gaacccatat tataatatag gttctttatt 351 cttttttaga atgaaataga aatgattatg aaataaaaaa ttcataattt 401 ttttagaatt attgtgaatc cattcccatc gaatatttag taatcaaatc 451 cttcaattca aagttttgag gtctttaaaa aagtagatta atcgaacgag 501 gacaaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt 551 tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag ggttcaagtc 601 cctctatccc c |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KJ434115.1 | nt | Paracolpodium altaicum voucher Alt ... | 962 bp | Paracolpodium altaicum | QL-PLN-00-007 | 611 bp | View |
| KJ539159.1 | nt | Paracolpodium sp. Alt 1108 tRNA-Leu... | 961 bp | Paracolpodium sp. Alt 1108 | QL-PLN-00-007 | 611 bp | View |
| OK247949.1 | nt | Hyalopoa nutans trnT-trnL intergeni... | 1706 bp | Hyalopoa nutans | QL-PLN-00-007 | 611 bp | View |
| OK247954.1 | nt | Paracolpodium colchicum trnT-trnL i... | 1732 bp | Paracolpodium colchicum | QL-PLN-00-007 | 611 bp | View |
| KM524070.1 | nt | Hyalopoa pontica voucher US:Soreng ... | 1707 bp | Hyalopoa pontica | QL-PLN-00-007 | 611 bp | View |
| KM524076.1 | nt | Paracolpodium altaicum voucher US:O... | 1711 bp | Paracolpodium altaicum | QL-PLN-00-007 | 611 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.