Amplicon details

Amplicon:

527 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcacgtttt ccgaaaacaa acaaaggttc
151   agaaagcgaa aataaaaaag gataggtgca gagactcgat ggaagctgtt
201   ctaacgaatg gagtttattg tcttacgtta atagaggaat ccttctatcg
251   aaacttcaga aaagatgaag gataaacctg tagacataat gtagacataa
301   tacagaagaa ttgttgtcaa tcgattccat attgaagaaa gaatcgaata
351   ttcattgata aaaccattca ctccataatc tgatagatct tttgaagaac
401   tgattaatcg gacgagaata aagatagagt cccgttctac atgtcaatac
451   cggcaacaat gaaatttata gtaagaggaa aatccgtcga tttcaaaaat
501   cgtgagggtt caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB070920.1 nt Taraxacum officinale chloroplast DN... 1488 bp Taraxacum officinale QL-PLN-00-007 527 bp View
MN689809.1 nt Taraxacum coreanum chloroplast, com... 151338 bp Taraxacum coreanum QL-PLN-00-007 527 bp View
ON641329.1 nt Taraxacum officinale isolate BPTPS0... 151323 bp Taraxacum officinale QL-PLN-00-007 527 bp View
OL875302.1 nt Taraxacum mongolicum chloroplast, c... 151344 bp Taraxacum mongolicum QL-PLN-00-007 527 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.