Amplicon details

Amplicon:

614 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctactaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagt ggttctcgaa
151   ctagaatcca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg agttgattac gttgtgttgg tagtggaact ctctctaaat
251   ttagagaaag taagggcttt atacatctaa tacacacgta tagatactga
301   catagcaaac gattaatcac ggaacccata tcataatata ggttctttat
351   tcttttttag aatgaaatta ggaatgatta tgaaatagaa aattctgaat
401   ttttttagaa ttattgtgaa cccattccaa tcgaatattg agtaatcaaa
451   tccttcaatt catagttttc gagatctttt aaaaagtgga ttaatcggac
501   gaggataaag agagagtccc attctacatg tcaatactga caacaatgaa
551   atttctagta aaaggaaaat ccgtcgactt tataagttgt gagggttcaa
601   gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MK393372.1 nt Ampelocalamus saxatilis chloroplast... 139643 bp Ampelocalamus saxatilis QL-PLN-00-007 614 bp View
MK393373.1 nt Ampelocalamus yongshanensis chlorop... 139633 bp Ampelocalamus yongshanensis QL-PLN-00-007 614 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.